Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 RPL42AYNL162W 321 nt1.15□□□□□ -2.23
SSH1P38353 YPR099CYPR099C 357 nt1.15□□□□□ -2.23
SSH1P38353 YPR146CYPR146C 330 nt1.15□□□□□ -2.23
SSH1P38353 DGR2YKL121W 2559 nt1.15□□□□□ -2.23
SSH1P38353 YCS4YLR272C 3531 nt1.15□□□□□ -2.23
SSH1P38353 EST2YLR318W 2655 nt1.14□□□□□ -2.23
SSH1P38353 YHL037CYHL037C 402 nt1.14□□□□□ -2.23
SSH1P38353 YBL073WYBL073W 312 nt1.14□□□□□ -2.23
SSH1P38353 GAL7YBR018C 1101 nt1.14□□□□□ -2.23
SSH1P38353 YPR039WYPR039W 336 nt1.14□□□□□ -2.23
SSH1P38353 MAD1YGL086W 2250 nt1.13□□□□□ -2.23
SSH1P38353 tH(GUG)E1tH(GUG)E1 72 nt1.13□□□□□ -2.23
SSH1P38353 tH(GUG)E2tH(GUG)E2 72 nt1.13□□□□□ -2.23
SSH1P38353 tH(GUG)G1tH(GUG)G1 72 nt1.13□□□□□ -2.23
SSH1P38353 tH(GUG)G2tH(GUG)G2 72 nt1.13□□□□□ -2.23
SSH1P38353 tH(GUG)HtH(GUG)H 72 nt1.13□□□□□ -2.23
SSH1P38353 tH(GUG)KtH(GUG)K 72 nt1.13□□□□□ -2.23
SSH1P38353 tH(GUG)MtH(GUG)M 72 nt1.13□□□□□ -2.23
SSH1P38353 EMC5YIL027C 426 nt1.13□□□□□ -2.23
SSH1P38353 TMA22YJR014W 597 nt1.13□□□□□ -2.23
SSH1P38353 RPL40BYKR094C 387 nt1.13□□□□□ -2.23
SSH1P38353 RRT15YLR162W-A 189 nt1.13□□□□□ -2.23
SSH1P38353 EGD1YPL037C 474 nt1.13□□□□□ -2.23
SSH1P38353 SPR3YGR059W 1539 nt1.13□□□□□ -2.23
SSH1P38353 MVP1YMR004W 1536 nt1.12□□□□□ -2.23
SSH1P38353 snR84snR84 550 nt1.12□□□□□ -2.23
SSH1P38353 YER135CYER135C 393 nt1.12□□□□□ -2.23
SSH1P38353 HUR1YGL168W 333 nt1.12□□□□□ -2.23
SSH1P38353 NOP15YNL110C 663 nt1.12□□□□□ -2.23
SSH1P38353 FMP23YBR047W 528 nt1.12□□□□□ -2.23
SSH1P38353 ZRG17YNR039C 1818 nt1.12□□□□□ -2.23
SSH1P38353 HDA3YPR179C 1968 nt1.11□□□□□ -2.23
SSH1P38353 YDR008CYDR008C 351 nt1.11□□□□□ -2.23
SSH1P38353 YDR509WYDR509W 348 nt1.11□□□□□ -2.23
SSH1P38353 YNR025CYNR025C 360 nt1.11□□□□□ -2.23
SSH1P38353 PAN3YKL025C 2040 nt1.1□□□□□ -2.23
SSH1P38353 MET32YDR253C 576 nt1.1□□□□□ -2.23
SSH1P38353 MTC7YEL033W 420 nt1.1□□□□□ -2.23
SSH1P38353 STE18YJR086W 333 nt1.1□□□□□ -2.23
SSH1P38353 RPL33BYOR234C 324 nt1.1□□□□□ -2.23
SSH1P38353 MSS11YMR164C 2277 nt1.1□□□□□ -2.23
SSH1P38353 APL1YJR005W 2103 nt1.1□□□□□ -2.23
SSH1P38353 YAP3YHL009C 993 nt1.09□□□□□ -2.23
SSH1P38353 YBR032WYBR032W 303 nt1.09□□□□□ -2.23
SSH1P38353 UFD2YDL190C 2886 nt1.09□□□□□ -2.24
SSH1P38353 YNL284C-BYNL284C-B 5268 nt1.08□□□□□ -2.24
SSH1P38353 SMC4YLR086W 4257 nt1.07□□□□□ -2.24
SSH1P38353 MAK10YEL053C 2202 nt1.07□□□□□ -2.24
SSH1P38353 YDR003W-AYDR003W-A 123 nt1.07□□□□□ -2.24
SSH1P38353 YER023C-AYER023C-A 213 nt1.07□□□□□ -2.24
SSH1P38353 RPL9AYGL147C 576 nt1.07□□□□□ -2.24
SSH1P38353 HIT1YJR055W 495 nt1.07□□□□□ -2.24
SSH1P38353 ROM2YLR371W 4071 nt1.06□□□□□ -2.24
SSH1P38353 NUT1YGL151W 3399 nt1.06□□□□□ -2.24
SSH1P38353 NUP188YML103C 4968 nt1.06□□□□□ -2.24
SSH1P38353 YDL158CYDL158C 309 nt1.06□□□□□ -2.24
SSH1P38353 EMC4YGL231C 573 nt1.06□□□□□ -2.24
SSH1P38353 YGR025WYGR025W 303 nt1.06□□□□□ -2.24
SSH1P38353 YOR376WYOR376W 369 nt1.06□□□□□ -2.24
SSH1P38353 YOP1YPR028W 543 nt1.06□□□□□ -2.24
SSH1P38353 YPR153WYPR153W 423 nt1.06□□□□□ -2.24
SSH1P38353 CDC39YCR093W 6327 nt1.06□□□□□ -2.24
SSH1P38353 MSH3YCR092C 3057 nt1.05□□□□□ -2.24
SSH1P38353 PAU2YEL049W 363 nt1.05□□□□□ -2.24
SSH1P38353 YGL217CYGL217C 342 nt1.05□□□□□ -2.24
SSH1P38353 YHL009W-AYHL009W-A 1242 nt1.05□□□□□ -2.24
SSH1P38353 APQ13YJL075C 417 nt1.05□□□□□ -2.24
SSH1P38353 snR13snR13 124 nt1.05□□□□□ -2.24
SSH1P38353 HMLALPHA2YCL067C 633 nt1.04□□□□□ -2.24
SSH1P38353 MATALPHA2YCR039C 633 nt1.04□□□□□ -2.24
SSH1P38353 YHR139C-AYHR139C-A 312 nt1.04□□□□□ -2.24
SSH1P38353 TIM18YOR297C 579 nt1.04□□□□□ -2.24
SSH1P38353 SCC2YDR180W 4482 nt1.04□□□□□ -2.24
SSH1P38353 TOF2YKR010C 2316 nt1.04□□□□□ -2.24
SSH1P38353 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
SSH1P38353 SWI5YDR146C 2130 nt1.03□□□□□ -2.24
SSH1P38353 LAA1YJL207C 6045 nt1.03□□□□□ -2.24
SSH1P38353 YBR071WYBR071W 636 nt1.03□□□□□ -2.24
SSH1P38353 YOR192C-AYOR192C-A 1317 nt1.03□□□□□ -2.24
SSH1P38353 SPO23YBR250W 1572 nt1.03□□□□□ -2.24
SSH1P38353 YDL211CYDL211C 1119 nt1.02□□□□□ -2.25
SSH1P38353 ENV11YGR071C 2583 nt1.02□□□□□ -2.25
SSH1P38353 RPL32YBL092W 393 nt1.02□□□□□ -2.25
SSH1P38353 AZF1YOR113W 2745 nt1.02□□□□□ -2.25
SSH1P38353 SLX4YLR135W 2247 nt1.01□□□□□ -2.25
SSH1P38353 RAD50YNL250W 3939 nt1.01□□□□□ -2.25
SSH1P38353 SRP14YDL092W 441 nt1.01□□□□□ -2.25
SSH1P38353 YER084W-AYER084W-A 513 nt1.01□□□□□ -2.25
SSH1P38353 RTR1YER139C 681 nt1.01□□□□□ -2.25
SSH1P38353 BIG1YHR101C 1008 nt1.01□□□□□ -2.25
SSH1P38353 RPL34BYIL052C 366 nt1.01□□□□□ -2.25
SSH1P38353 YML009C-AYML009C-A 327 nt1.01□□□□□ -2.25
SSH1P38353 CLU1YMR012W 3834 nt1.01□□□□□ -2.25
SSH1P38353 GPI15YNL038W 690 nt1.01□□□□□ -2.25
SSH1P38353 LYS14YDR034C 2373 nt1□□□□□ -2.25
SSH1P38353 DOP1YDR141C 5097 nt1□□□□□ -2.25
SSH1P38353 SWI4YER111C 3282 nt1□□□□□ -2.25
SSH1P38353 PIG1YLR273C 1947 nt1□□□□□ -2.25
SSH1P38353 MXR1YER042W 555 nt1□□□□□ -2.25
SSH1P38353 EAF6YJR082C 342 nt1□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms