Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 SPO22YIL073C 2928 nt2.77□□□□□ -1.97
TY1A-ER1P0CX71 STB4YMR019W 2850 nt2.77□□□□□ -1.97
TY1A-ER1P0CX71 MSC6YOR354C 2079 nt2.77□□□□□ -1.97
TY1A-ER1P0CX71 EMC6YLL014W 327 nt2.77□□□□□ -1.97
TY1A-ER1P0CX71 PRP42YDR235W 1635 nt2.77□□□□□ -1.97
TY1A-ER1P0CX71 YKU80YMR106C 1890 nt2.77□□□□□ -1.97
TY1A-ER1P0CX71 ARO80YDR421W 2853 nt2.77□□□□□ -1.97
TY1A-ER1P0CX71 TCB3YML072C 4638 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 ESL1YIL151C 3357 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 SRP14YDL092W 441 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 YGR050CYGR050C 357 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 YHR071C-AYHR071C-A 321 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 RPL33BYOR234C 324 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 LRG1YDL240W 3054 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 MAK21YDR060W 3078 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 SMY2YBR172C 2223 nt2.76□□□□□ -1.97
TY1A-ER1P0CX71 YGR027W-BYGR027W-B 5268 nt2.75□□□□□ -1.97
TY1A-ER1P0CX71 YLR227W-BYLR227W-B 5268 nt2.75□□□□□ -1.97
TY1A-ER1P0CX71 YPR158C-DYPR158C-D 5268 nt2.75□□□□□ -1.97
TY1A-ER1P0CX71 SET2YJL168C 2202 nt2.75□□□□□ -1.97
TY1A-ER1P0CX71 YLL007CYLL007C 1998 nt2.75□□□□□ -1.97
TY1A-ER1P0CX71 YAL042C-AYAL042C-A 378 nt2.75□□□□□ -1.97
TY1A-ER1P0CX71 CHS2YBR038W 2892 nt2.75□□□□□ -1.97
TY1A-ER1P0CX71 DRS2YAL026C 4068 nt2.75□□□□□ -1.97
TY1A-ER1P0CX71 BUD4YJR092W 4344 nt2.74□□□□□ -1.97
TY1A-ER1P0CX71 GIS1YDR096W 2685 nt2.74□□□□□ -1.97
TY1A-ER1P0CX71 YIR044CYIR044C 186 nt2.74□□□□□ -1.97
TY1A-ER1P0CX71 YBL053WYBL053W 375 nt2.74□□□□□ -1.97
TY1A-ER1P0CX71 MGM1YOR211C 2646 nt2.74□□□□□ -1.97
TY1A-ER1P0CX71 LYS14YDR034C 2373 nt2.74□□□□□ -1.97
TY1A-ER1P0CX71 SIN3YOL004W 4611 nt2.74□□□□□ -1.97
TY1A-ER1P0CX71 CDC53YDL132W 2448 nt2.73□□□□□ -1.97
TY1A-ER1P0CX71 VTC3YPL019C 2508 nt2.73□□□□□ -1.97
TY1A-ER1P0CX71 HOS4YIL112W 3252 nt2.73□□□□□ -1.97
TY1A-ER1P0CX71 YFR016CYFR016C 3702 nt2.73□□□□□ -1.97
TY1A-ER1P0CX71 UTP14YML093W 2700 nt2.73□□□□□ -1.97
TY1A-ER1P0CX71 YBT1YLL048C 4986 nt2.72□□□□□ -1.97
TY1A-ER1P0CX71 SPC98YNL126W 2541 nt2.72□□□□□ -1.97
TY1A-ER1P0CX71 YBR174CYBR174C 315 nt2.72□□□□□ -1.97
TY1A-ER1P0CX71 FLO11YIR019C 4104 nt2.72□□□□□ -1.97
TY1A-ER1P0CX71 TFC4YGR047C 3078 nt2.72□□□□□ -1.97
TY1A-ER1P0CX71 VMR1YHL035C 4779 nt2.72□□□□□ -1.97
TY1A-ER1P0CX71 CAF120YNL278W 3183 nt2.71□□□□□ -1.97
TY1A-ER1P0CX71 SWR1YDR334W 4545 nt2.71□□□□□ -1.98
TY1A-ER1P0CX71 PMP1YCR024C-A 123 nt2.71□□□□□ -1.98
TY1A-ER1P0CX71 YDR182W-AYDR182W-A 204 nt2.71□□□□□ -1.98
TY1A-ER1P0CX71 RPL6AYML073C 531 nt2.71□□□□□ -1.98
TY1A-ER1P0CX71 SLH1YGR271W 5904 nt2.71□□□□□ -1.98
TY1A-ER1P0CX71 INP51YIL002C 2841 nt2.71□□□□□ -1.98
TY1A-ER1P0CX71 REC8YPR007C 2043 nt2.7□□□□□ -1.98
TY1A-ER1P0CX71 SPO75YLL005C 2607 nt2.7□□□□□ -1.98
TY1A-ER1P0CX71 YOR345CYOR345C 351 nt2.7□□□□□ -1.98
TY1A-ER1P0CX71 YIL080WYIL080W 4722 nt2.7□□□□□ -1.98
TY1A-ER1P0CX71 NCA2YPR155C 1851 nt2.69□□□□□ -1.98
TY1A-ER1P0CX71 YCR043CYCR043C 384 nt2.69□□□□□ -1.98
TY1A-ER1P0CX71 MNE1YOR350C 1992 nt2.69□□□□□ -1.98
TY1A-ER1P0CX71 CBF2YGR140W 2871 nt2.68□□□□□ -1.98
TY1A-ER1P0CX71 RPL34BYIL052C 366 nt2.68□□□□□ -1.98
TY1A-ER1P0CX71 YKL162C-AYKL162C-A 153 nt2.68□□□□□ -1.98
TY1A-ER1P0CX71 RPS25BYLR333C 327 nt2.68□□□□□ -1.98
TY1A-ER1P0CX71 MRD1YPR112C 2664 nt2.68□□□□□ -1.98
TY1A-ER1P0CX71 NFT1YKR103W 3657 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 YHL005CYHL005C 393 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 YHR210CYHR210C 1026 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 PAU8YAL068C 363 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 PAU18YLL064C 363 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 PAU6YNR076W 363 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 PAU20YOL161C 363 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 PMR1YGL167C 2853 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 ZRG17YNR039C 1818 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 SPO21YOL091W 1830 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 BUB1YGR188C 3066 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 FLO1YAR050W 4614 nt2.67□□□□□ -1.98
TY1A-ER1P0CX71 PUT3YKL015W 2940 nt2.66□□□□□ -1.98
TY1A-ER1P0CX71 TMA17YDL110C 453 nt2.66□□□□□ -1.98
TY1A-ER1P0CX71 AMS1YGL156W 3252 nt2.66□□□□□ -1.98
TY1A-ER1P0CX71 MOT1YPL082C 5604 nt2.66□□□□□ -1.98
TY1A-ER1P0CX71 FRT2YAL028W 1587 nt2.66□□□□□ -1.98
TY1A-ER1P0CX71 FLO5YHR211W 3228 nt2.65□□□□□ -1.98
TY1A-ER1P0CX71 YLR278CYLR278C 4026 nt2.65□□□□□ -1.98
TY1A-ER1P0CX71 DCP2YNL118C 2913 nt2.65□□□□□ -1.99
TY1A-ER1P0CX71 YLR012CYLR012C 300 nt2.65□□□□□ -1.99
TY1A-ER1P0CX71 YOR108C-AYOR108C-A 210 nt2.65□□□□□ -1.99
TY1A-ER1P0CX71 SMC6YLR383W 3345 nt2.65□□□□□ -1.99
TY1A-ER1P0CX71 YJL120WYJL120W 324 nt2.64□□□□□ -1.99
TY1A-ER1P0CX71 YOR394C-AYOR394C-A 168 nt2.64□□□□□ -1.99
TY1A-ER1P0CX71 SRB8YCR081W 4284 nt2.64□□□□□ -1.99
TY1A-ER1P0CX71 RLM1YPL089C 2031 nt2.64□□□□□ -1.99
TY1A-ER1P0CX71 TFC8YPL007C 1767 nt2.64□□□□□ -1.99
TY1A-ER1P0CX71 RAX2YLR084C 3663 nt2.63□□□□□ -1.99
TY1A-ER1P0CX71 NMD2YHR077C 3270 nt2.63□□□□□ -1.99
TY1A-ER1P0CX71 YCR102W-AYCR102W-A 198 nt2.63□□□□□ -1.99
TY1A-ER1P0CX71 COX19YLL018C-A 297 nt2.63□□□□□ -1.99
TY1A-ER1P0CX71 SIR3YLR442C 2937 nt2.63□□□□□ -1.99
TY1A-ER1P0CX71 ZIP2YGL249W 2115 nt2.63□□□□□ -1.99
TY1A-ER1P0CX71 SAS3YBL052C 2496 nt2.63□□□□□ -1.99
TY1A-ER1P0CX71 COY1YKL179C 2040 nt2.63□□□□□ -1.99
TY1A-ER1P0CX71 ZIP1YDR285W 2628 nt2.62□□□□□ -1.99
TY1A-ER1P0CX71 YLL019W-AYLL019W-A 93 nt2.62□□□□□ -1.99
TY1A-ER1P0CX71 YMR242W-AYMR242W-A 90 nt2.62□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms