Protein–RNA interactions for Protein: O13559

YRF1-4, Y' element ATP-dependent helicase protein 1 copy 4, yeastyeast

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-4O13559 TOM22YNL131W 459 nt1.86□□□□□ -2.11
YRF1-4O13559 CHC1YGL206C 4962 nt1.86□□□□□ -2.11
YRF1-4O13559 PMD1YER132C 5262 nt1.86□□□□□ -2.11
YRF1-4O13559 YLR101CYLR101C 396 nt1.85□□□□□ -2.11
YRF1-4O13559 ZEO1YOL109W 342 nt1.85□□□□□ -2.11
YRF1-4O13559 ERP4YOR016C 624 nt1.85□□□□□ -2.11
YRF1-4O13559 YPR099CYPR099C 357 nt1.85□□□□□ -2.11
YRF1-4O13559 SPC98YNL126W 2541 nt1.85□□□□□ -2.11
YRF1-4O13559 IML1YJR138W 4755 nt1.85□□□□□ -2.11
YRF1-4O13559 YBP1YBR216C 2025 nt1.85□□□□□ -2.11
YRF1-4O13559 TTI1YKL033W 3117 nt1.85□□□□□ -2.11
YRF1-4O13559 YER135CYER135C 393 nt1.85□□□□□ -2.11
YRF1-4O13559 PKH3YDR466W 2697 nt1.84□□□□□ -2.11
YRF1-4O13559 TRM732YMR259C 4263 nt1.84□□□□□ -2.12
YRF1-4O13559 YKL063CYKL063C 504 nt1.84□□□□□ -2.12
YRF1-4O13559 TRX1YLR043C 312 nt1.84□□□□□ -2.12
YRF1-4O13559 YML009C-AYML009C-A 327 nt1.84□□□□□ -2.12
YRF1-4O13559 YBR032WYBR032W 303 nt1.84□□□□□ -2.12
YRF1-4O13559 YPL205CYPL205C 345 nt1.84□□□□□ -2.12
YRF1-4O13559 snR41snR41 95 nt1.84□□□□□ -2.12
YRF1-4O13559 FIG2YCR089W 4830 nt1.83□□□□□ -2.12
YRF1-4O13559 YER023C-AYER023C-A 213 nt1.83□□□□□ -2.12
YRF1-4O13559 FMP23YBR047W 528 nt1.83□□□□□ -2.12
YRF1-4O13559 YBR121C-AYBR121C-A 159 nt1.83□□□□□ -2.12
YRF1-4O13559 YGR250CYGR250C 2346 nt1.83□□□□□ -2.12
YRF1-4O13559 TFC8YPL007C 1767 nt1.83□□□□□ -2.12
YRF1-4O13559 PAU2YEL049W 363 nt1.82□□□□□ -2.12
YRF1-4O13559 PAU12YGR294W 363 nt1.82□□□□□ -2.12
YRF1-4O13559 YHR139C-AYHR139C-A 312 nt1.82□□□□□ -2.12
YRF1-4O13559 CRG1YHR209W 876 nt1.82□□□□□ -2.12
YRF1-4O13559 URM1YIL008W 300 nt1.82□□□□□ -2.12
YRF1-4O13559 PAU18YLL064C 363 nt1.82□□□□□ -2.12
YRF1-4O13559 YBL073WYBL073W 312 nt1.82□□□□□ -2.12
YRF1-4O13559 PAU6YNR076W 363 nt1.82□□□□□ -2.12
YRF1-4O13559 YOR032W-AYOR032W-A 201 nt1.82□□□□□ -2.12
YRF1-4O13559 PAU24YBR301W 363 nt1.82□□□□□ -2.12
YRF1-4O13559 CTR9YOL145C 3234 nt1.81□□□□□ -2.12
YRF1-4O13559 UBP3YER151C 2739 nt1.81□□□□□ -2.12
YRF1-4O13559 MSH5YDL154W 2706 nt1.81□□□□□ -2.12
YRF1-4O13559 RVS161YCR009C 798 nt1.81□□□□□ -2.12
YRF1-4O13559 YER087C-AYER087C-A 552 nt1.81□□□□□ -2.12
YRF1-4O13559 YNL114CYNL114C 372 nt1.81□□□□□ -2.12
YRF1-4O13559 TOF2YKR010C 2316 nt1.81□□□□□ -2.12
YRF1-4O13559 PAN3YKL025C 2040 nt1.8□□□□□ -2.12
YRF1-4O13559 MSC6YOR354C 2079 nt1.8□□□□□ -2.12
YRF1-4O13559 ABM1YJR108W 372 nt1.8□□□□□ -2.12
YRF1-4O13559 CDC33YOL139C 642 nt1.8□□□□□ -2.12
YRF1-4O13559 YPL182CYPL182C 384 nt1.8□□□□□ -2.12
YRF1-4O13559 CLU1YMR012W 3834 nt1.79□□□□□ -2.12
YRF1-4O13559 MKT1YNL085W 2493 nt1.79□□□□□ -2.12
YRF1-4O13559 YMR153C-AYMR153C-A 336 nt1.79□□□□□ -2.12
YRF1-4O13559 YLR035C-AYLR035C-A 3468 nt1.79□□□□□ -2.12
YRF1-4O13559 HIR3YJR140C 4947 nt1.78□□□□□ -2.12
YRF1-4O13559 PAU3YCR104W 375 nt1.78□□□□□ -2.12
YRF1-4O13559 tH(GUG)E1tH(GUG)E1 72 nt1.78□□□□□ -2.12
YRF1-4O13559 tH(GUG)E2tH(GUG)E2 72 nt1.78□□□□□ -2.12
YRF1-4O13559 tH(GUG)G1tH(GUG)G1 72 nt1.78□□□□□ -2.12
YRF1-4O13559 tH(GUG)G2tH(GUG)G2 72 nt1.78□□□□□ -2.12
YRF1-4O13559 tH(GUG)HtH(GUG)H 72 nt1.78□□□□□ -2.12
YRF1-4O13559 tH(GUG)KtH(GUG)K 72 nt1.78□□□□□ -2.12
YRF1-4O13559 tH(GUG)MtH(GUG)M 72 nt1.78□□□□□ -2.12
YRF1-4O13559 YGL239CYGL239C 315 nt1.78□□□□□ -2.12
YRF1-4O13559 YML003WYML003W 873 nt1.78□□□□□ -2.12
YRF1-4O13559 NOP53YPL146C 1368 nt1.78□□□□□ -2.12
YRF1-4O13559 IRE1YHR079C 3348 nt1.78□□□□□ -2.12
YRF1-4O13559 MAD1YGL086W 2250 nt1.77□□□□□ -2.13
YRF1-4O13559 RPL42BYHR141C 321 nt1.77□□□□□ -2.13
YRF1-4O13559 VPS20YMR077C 666 nt1.77□□□□□ -2.13
YRF1-4O13559 RPL42AYNL162W 321 nt1.77□□□□□ -2.13
YRF1-4O13559 YNL324WYNL324W 396 nt1.77□□□□□ -2.13
YRF1-4O13559 YGR265WYGR265W 411 nt1.76□□□□□ -2.13
YRF1-4O13559 YHR028W-AYHR028W-A 321 nt1.76□□□□□ -2.13
YRF1-4O13559 YDR008CYDR008C 351 nt1.75□□□□□ -2.13
YRF1-4O13559 PHS1YJL097W 654 nt1.75□□□□□ -2.13
YRF1-4O13559 YLR406C-AYLR406C-A 150 nt1.75□□□□□ -2.13
YRF1-4O13559 MDS3YGL197W 4464 nt1.75□□□□□ -2.13
YRF1-4O13559 YDR509WYDR509W 348 nt1.74□□□□□ -2.13
YRF1-4O13559 DIE2YGR227W 1578 nt1.74□□□□□ -2.13
YRF1-4O13559 GDS1YOR355W 1569 nt1.74□□□□□ -2.13
YRF1-4O13559 RLM1YPL089C 2031 nt1.74□□□□□ -2.13
YRF1-4O13559 SKI3YPR189W 4299 nt1.74□□□□□ -2.13
YRF1-4O13559 KCS1YDR017C 3153 nt1.74□□□□□ -2.13
YRF1-4O13559 RUF22RUF22 515 nt1.73□□□□□ -2.13
YRF1-4O13559 YBL071CYBL071C 309 nt1.73□□□□□ -2.13
YRF1-4O13559 YOR343W-BYOR343W-B 5313 nt1.73□□□□□ -2.13
YRF1-4O13559 HDA3YPR179C 1968 nt1.73□□□□□ -2.13
YRF1-4O13559 UBR2YLR024C 5619 nt1.73□□□□□ -2.13
YRF1-4O13559 MAK10YEL053C 2202 nt1.73□□□□□ -2.13
YRF1-4O13559 SAR1YPL218W 573 nt1.72□□□□□ -2.13
YRF1-4O13559 YBR174CYBR174C 315 nt1.72□□□□□ -2.13
YRF1-4O13559 tQ(UUG)E2tQ(UUG)E2 72 nt1.72□□□□□ -2.13
YRF1-4O13559 YLR287CYLR287C 1068 nt1.72□□□□□ -2.13
YRF1-4O13559 MRPL50YNR022C 420 nt1.72□□□□□ -2.13
YRF1-4O13559 RPS30BYOR182C 192 nt1.72□□□□□ -2.13
YRF1-4O13559 PRM3YPL192C 402 nt1.72□□□□□ -2.13
YRF1-4O13559 YLR422WYLR422W 5799 nt1.71□□□□□ -2.14
YRF1-4O13559 YHL009W-AYHL009W-A 1242 nt1.71□□□□□ -2.14
YRF1-4O13559 YIL066W-AYIL066W-A 444 nt1.71□□□□□ -2.14
YRF1-4O13559 YLR264C-AYLR264C-A 117 nt1.71□□□□□ -2.14
YRF1-4O13559 ZRG17YNR039C 1818 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms