Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.03■□□□□ 0.32
TRBV23-1A0A0A0MS06 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC133552.2-202ENST00000575694 574 ntBASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV23-1A0A0A0MS06 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TRBV23-1A0A0A0MS06 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 AC100791.3-201ENST00000617619 330 ntBASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV23-1A0A0A0MS06 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 PGM5P4-201ENST00000421970 445 ntBASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 CROCCP5-201ENST00000436658 830 ntBASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 AC016405.3-201ENST00000607710 860 ntBASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV23-1A0A0A0MS06 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 AL512625.2-201ENST00000417533 625 ntBASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 AC090192.1-201ENST00000517740 490 ntBASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV23-1A0A0A0MS06 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV23-1A0A0A0MS06 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms