Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 FSH1YHR049W 732 nt0.89□□□□□ -2.27
SHH3Q04487 YHR054CYHR054C 1065 nt0.89□□□□□ -2.27
SHH3Q04487 RPL40BYKR094C 387 nt0.89□□□□□ -2.27
SHH3Q04487 YMR013C-AYMR013C-A 150 nt0.89□□□□□ -2.27
SHH3Q04487 YPL039WYPL039W 951 nt0.89□□□□□ -2.27
SHH3Q04487 ATP20YPR020W 348 nt0.89□□□□□ -2.27
SHH3Q04487 YPR063CYPR063C 423 nt0.89□□□□□ -2.27
SHH3Q04487 YCL046WYCL046W 324 nt0.89□□□□□ -2.27
SHH3Q04487 SPO75YLL005C 2607 nt0.88□□□□□ -2.27
SHH3Q04487 YCR100CYCR100C 951 nt0.88□□□□□ -2.27
SHH3Q04487 YDR461C-AYDR461C-A 243 nt0.88□□□□□ -2.27
SHH3Q04487 YLL020CYLL020C 306 nt0.88□□□□□ -2.27
SHH3Q04487 POP7YBR167C 423 nt0.88□□□□□ -2.27
SHH3Q04487 VPS52YDR484W 1926 nt0.87□□□□□ -2.27
SHH3Q04487 YDL211CYDL211C 1119 nt0.87□□□□□ -2.27
SHH3Q04487 EMT1tM(CAU)D 73 nt0.87□□□□□ -2.27
SHH3Q04487 EMT5tM(CAU)J1 73 nt0.87□□□□□ -2.27
SHH3Q04487 EMT3tM(CAU)J2 73 nt0.87□□□□□ -2.27
SHH3Q04487 EMT4tM(CAU)M 73 nt0.87□□□□□ -2.27
SHH3Q04487 EMT2tM(CAU)O2 73 nt0.87□□□□□ -2.27
SHH3Q04487 COX7YMR256C 183 nt0.87□□□□□ -2.27
SHH3Q04487 SIP4YJL089W 2490 nt0.86□□□□□ -2.27
SHH3Q04487 snR5snR5 204 nt0.86□□□□□ -2.27
SHH3Q04487 YGL217CYGL217C 342 nt0.86□□□□□ -2.27
SHH3Q04487 YGR265WYGR265W 411 nt0.86□□□□□ -2.27
SHH3Q04487 YHL009W-AYHL009W-A 1242 nt0.86□□□□□ -2.27
SHH3Q04487 YPT6YLR262C 648 nt0.86□□□□□ -2.27
SHH3Q04487 TIM18YOR297C 579 nt0.86□□□□□ -2.27
SHH3Q04487 REV3YPL167C 4515 nt0.85□□□□□ -2.27
SHH3Q04487 YDR220CYDR220C 294 nt0.85□□□□□ -2.27
SHH3Q04487 YGL109WYGL109W 324 nt0.85□□□□□ -2.27
SHH3Q04487 LRP1YHR081W 555 nt0.85□□□□□ -2.27
SHH3Q04487 RPL42BYHR141C 321 nt0.85□□□□□ -2.27
SHH3Q04487 PAU18YLL064C 363 nt0.85□□□□□ -2.27
SHH3Q04487 CTK3YML112W 891 nt0.85□□□□□ -2.27
SHH3Q04487 DDR48YMR173W 1293 nt0.85□□□□□ -2.27
SHH3Q04487 RPL42AYNL162W 321 nt0.85□□□□□ -2.27
SHH3Q04487 PAU6YNR076W 363 nt0.85□□□□□ -2.27
SHH3Q04487 FMP23YBR047W 528 nt0.85□□□□□ -2.27
SHH3Q04487 YBR184WYBR184W 1572 nt0.85□□□□□ -2.27
SHH3Q04487 RAD50YNL250W 3939 nt0.85□□□□□ -2.27
SHH3Q04487 KIP1YBL063W 3336 nt0.85□□□□□ -2.27
SHH3Q04487 SEC5YDR166C 2916 nt0.85□□□□□ -2.27
SHH3Q04487 YEL018C-AYEL018C-A 534 nt0.84□□□□□ -2.27
SHH3Q04487 tT(UGU)Q1tT(UGU)Q1 76 nt0.84□□□□□ -2.27
SHH3Q04487 tV(UAC)BtV(UAC)B 74 nt0.84□□□□□ -2.27
SHH3Q04487 tV(UAC)DtV(UAC)D 74 nt0.84□□□□□ -2.27
SHH3Q04487 PKR1YMR123W 369 nt0.84□□□□□ -2.27
SHH3Q04487 YNL146C-AYNL146C-A 195 nt0.84□□□□□ -2.27
SHH3Q04487 YJR098CYJR098C 1971 nt0.84□□□□□ -2.28
SHH3Q04487 ROM2YLR371W 4071 nt0.84□□□□□ -2.28
SHH3Q04487 CDC39YCR093W 6327 nt0.84□□□□□ -2.28
SHH3Q04487 SPR3YGR059W 1539 nt0.84□□□□□ -2.28
SHH3Q04487 YJR029WYJR029W 5268 nt0.83□□□□□ -2.28
SHH3Q04487 YPR137C-BYPR137C-B 5268 nt0.83□□□□□ -2.28
SHH3Q04487 SLX4YLR135W 2247 nt0.83□□□□□ -2.28
SHH3Q04487 snR79snR79 84 nt0.83□□□□□ -2.28
SHH3Q04487 CHZ1YER030W 462 nt0.83□□□□□ -2.28
SHH3Q04487 TIM10YHR005C-A 282 nt0.83□□□□□ -2.28
SHH3Q04487 SDS22YKL193C 1017 nt0.83□□□□□ -2.28
SHH3Q04487 YAL066WYAL066W 309 nt0.83□□□□□ -2.28
SHH3Q04487 RPS18BYML026C 441 nt0.83□□□□□ -2.28
SHH3Q04487 YBL073WYBL073W 312 nt0.83□□□□□ -2.28
SHH3Q04487 YPR146CYPR146C 330 nt0.83□□□□□ -2.28
SHH3Q04487 BI4Q0120 1917 nt0.83□□□□□ -2.28
SHH3Q04487 SEF1YBL066C 3447 nt0.83□□□□□ -2.28
SHH3Q04487 MAK10YEL053C 2202 nt0.82□□□□□ -2.28
SHH3Q04487 IRR1YIL026C 3453 nt0.81□□□□□ -2.28
SHH3Q04487 MUK1YPL070W 1839 nt0.81□□□□□ -2.28
SHH3Q04487 PAU2YEL049W 363 nt0.81□□□□□ -2.28
SHH3Q04487 RTR1YER139C 681 nt0.81□□□□□ -2.28
SHH3Q04487 YGR228WYGR228W 345 nt0.81□□□□□ -2.28
SHH3Q04487 SPC1YJR010C-A 285 nt0.81□□□□□ -2.28
SHH3Q04487 YJR140W-AYJR140W-A 150 nt0.81□□□□□ -2.28
SHH3Q04487 snR14snR14 160 nt0.81□□□□□ -2.28
SHH3Q04487 YPL197CYPL197C 414 nt0.81□□□□□ -2.28
SHH3Q04487 YPR147CYPR147C 915 nt0.81□□□□□ -2.28
SHH3Q04487 YCL002CYCL002C 792 nt0.81□□□□□ -2.28
SHH3Q04487 ZRG17YNR039C 1818 nt0.8□□□□□ -2.28
SHH3Q04487 IFH1YLR223C 3258 nt0.8□□□□□ -2.28
SHH3Q04487 MND1YGL183C 660 nt0.8□□□□□ -2.28
SHH3Q04487 YPR096CYPR096C 303 nt0.8□□□□□ -2.28
SHH3Q04487 EAF1YDR359C 2949 nt0.8□□□□□ -2.28
SHH3Q04487 STB6YKL072W 2301 nt0.8□□□□□ -2.28
SHH3Q04487 SMC1YFL008W 3678 nt0.79□□□□□ -2.28
SHH3Q04487 YDR169C-AYDR169C-A 150 nt0.79□□□□□ -2.28
SHH3Q04487 SMB1YER029C 591 nt0.79□□□□□ -2.28
SHH3Q04487 YER121WYER121W 345 nt0.79□□□□□ -2.28
SHH3Q04487 SWI4YER111C 3282 nt0.79□□□□□ -2.28
SHH3Q04487 YDL152WYDL152W 366 nt0.78□□□□□ -2.28
SHH3Q04487 YGL015CYGL015C 393 nt0.78□□□□□ -2.28
SHH3Q04487 YKL111CYKL111C 336 nt0.78□□□□□ -2.28
SHH3Q04487 YMR254CYMR254C 309 nt0.78□□□□□ -2.28
SHH3Q04487 YOR161W-BYOR161W-B 261 nt0.78□□□□□ -2.28
SHH3Q04487 CSM4YPL200W 471 nt0.78□□□□□ -2.28
SHH3Q04487 YBR063CYBR063C 1215 nt0.78□□□□□ -2.28
SHH3Q04487 YFL002W-BYFL002W-B 1317 nt0.78□□□□□ -2.28
SHH3Q04487 YGR161W-AYGR161W-A 1317 nt0.78□□□□□ -2.28
SHH3Q04487 YBL100W-AYBL100W-A 1317 nt0.78□□□□□ -2.28
SHH3Q04487 YOR192C-AYOR192C-A 1317 nt0.78□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 113.5 ms