Protein–RNA interactions for Protein: P53551

HHO1, Histone H1, yeastyeast

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HHO1P53551 HTD2YHR067W 843 nt0.51□□□□□ -2.33
HHO1P53551 RPL16AYIL133C 600 nt0.51□□□□□ -2.33
HHO1P53551 TOF2YKR010C 2316 nt0.51□□□□□ -2.33
HHO1P53551 YBR012CYBR012C 420 nt0.51□□□□□ -2.33
HHO1P53551 snR44snR44 211 nt0.51□□□□□ -2.33
HHO1P53551 YCL046WYCL046W 324 nt0.51□□□□□ -2.33
HHO1P53551 YML002WYML002W 2214 nt0.5□□□□□ -2.33
HHO1P53551 YJR098CYJR098C 1971 nt0.5□□□□□ -2.33
HHO1P53551 SMB1YER029C 591 nt0.5□□□□□ -2.33
HHO1P53551 RSM18YER050C 417 nt0.5□□□□□ -2.33
HHO1P53551 IRC14YOR135C 342 nt0.5□□□□□ -2.33
HHO1P53551 NCS2YNL119W 1482 nt0.49□□□□□ -2.33
HHO1P53551 ATC1YDR184C 885 nt0.49□□□□□ -2.33
HHO1P53551 MXR1YER042W 555 nt0.49□□□□□ -2.33
HHO1P53551 IES5YER092W 378 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)BtT(AGU)B 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)CtT(AGU)C 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)DtT(AGU)D 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)HtT(AGU)H 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)I1tT(AGU)I1 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)I2tT(AGU)I2 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)JtT(AGU)J 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)N1tT(AGU)N1 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)N2tT(AGU)N2 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)O1tT(AGU)O1 73 nt0.49□□□□□ -2.33
HHO1P53551 tT(AGU)O2tT(AGU)O2 73 nt0.49□□□□□ -2.33
HHO1P53551 UTP10YJL109C 5310 nt0.48□□□□□ -2.33
HHO1P53551 CHZ1YER030W 462 nt0.48□□□□□ -2.33
HHO1P53551 CRG1YHR209W 876 nt0.48□□□□□ -2.33
HHO1P53551 VPS63YLR261C 327 nt0.48□□□□□ -2.33
HHO1P53551 NBP1YLR457C 960 nt0.48□□□□□ -2.33
HHO1P53551 ATG16YMR159C 453 nt0.48□□□□□ -2.33
HHO1P53551 NUP82YJL061W 2142 nt0.47□□□□□ -2.33
HHO1P53551 SWF1YDR126W 1011 nt0.47□□□□□ -2.33
HHO1P53551 YDR248CYDR248C 582 nt0.47□□□□□ -2.33
HHO1P53551 VPS74YDR372C 1038 nt0.47□□□□□ -2.33
HHO1P53551 YER121WYER121W 345 nt0.47□□□□□ -2.33
HHO1P53551 LSO2YGR169C-A 279 nt0.47□□□□□ -2.33
HHO1P53551 PAU18YLL064C 363 nt0.47□□□□□ -2.33
HHO1P53551 RPL38YLR325C 237 nt0.47□□□□□ -2.33
HHO1P53551 PAU6YNR076W 363 nt0.47□□□□□ -2.33
HHO1P53551 YBR221W-AYBR221W-A 105 nt0.47□□□□□ -2.33
HHO1P53551 SWI6YLR182W 2412 nt0.47□□□□□ -2.33
HHO1P53551 GPM2YDL021W 936 nt0.46□□□□□ -2.34
HHO1P53551 YDL196WYDL196W 330 nt0.46□□□□□ -2.34
HHO1P53551 YGL109WYGL109W 324 nt0.46□□□□□ -2.34
HHO1P53551 BMT5YIL096C 1011 nt0.46□□□□□ -2.34
HHO1P53551 SET3YKR029C 2256 nt0.46□□□□□ -2.34
HHO1P53551 RIM20YOR275C 1986 nt0.46□□□□□ -2.34
HHO1P53551 MPT5YGL178W 2580 nt0.45□□□□□ -2.34
HHO1P53551 YDL068WYDL068W 330 nt0.45□□□□□ -2.34
HHO1P53551 RUB1YDR139C 234 nt0.45□□□□□ -2.34
HHO1P53551 YOR199WYOR199W 330 nt0.45□□□□□ -2.34
HHO1P53551 TYE7YOR344C 876 nt0.45□□□□□ -2.34
HHO1P53551 YDL206WYDL206W 2289 nt0.45□□□□□ -2.34
HHO1P53551 REF2YDR195W 1602 nt0.45□□□□□ -2.34
HHO1P53551 KAR3YPR141C 2190 nt0.45□□□□□ -2.34
HHO1P53551 YBR184WYBR184W 1572 nt0.45□□□□□ -2.34
HHO1P53551 RNR4YGR180C 1038 nt0.44□□□□□ -2.34
HHO1P53551 GIM5YML094W 492 nt0.44□□□□□ -2.34
HHO1P53551 NUT2YPR168W 474 nt0.44□□□□□ -2.34
HHO1P53551 YBR200W-AYBR200W-A 165 nt0.44□□□□□ -2.34
HHO1P53551 PIG1YLR273C 1947 nt0.43□□□□□ -2.34
HHO1P53551 YHR052W-AYHR052W-A 195 nt0.43□□□□□ -2.34
HHO1P53551 YHR054W-AYHR054W-A 195 nt0.43□□□□□ -2.34
HHO1P53551 YLR366WYLR366W 306 nt0.43□□□□□ -2.34
HHO1P53551 RPS7BYNL096C 573 nt0.43□□□□□ -2.34
HHO1P53551 SUS1YBR111W-A 291 nt0.43□□□□□ -2.34
HHO1P53551 SLM6YBR266C 453 nt0.43□□□□□ -2.34
HHO1P53551 YLL007CYLL007C 1998 nt0.43□□□□□ -2.34
HHO1P53551 YDR034C-CYDR034C-C 1317 nt0.42□□□□□ -2.34
HHO1P53551 YFL002W-BYFL002W-B 1317 nt0.42□□□□□ -2.34
HHO1P53551 YGR161W-AYGR161W-A 1317 nt0.42□□□□□ -2.34
HHO1P53551 YLR410W-AYLR410W-A 1317 nt0.42□□□□□ -2.34
HHO1P53551 YBL100W-AYBL100W-A 1317 nt0.42□□□□□ -2.34
HHO1P53551 YOR192C-AYOR192C-A 1317 nt0.42□□□□□ -2.34
HHO1P53551 YCL020WYCL020W 1317 nt0.42□□□□□ -2.34
HHO1P53551 YBR032WYBR032W 303 nt0.42□□□□□ -2.34
HHO1P53551 NOC3YLR002C 1992 nt0.42□□□□□ -2.34
HHO1P53551 LTE1YAL024C 4308 nt0.42□□□□□ -2.34
HHO1P53551 snR83snR83 306 nt0.41□□□□□ -2.34
HHO1P53551 RPL42BYHR141C 321 nt0.41□□□□□ -2.34
HHO1P53551 TIM8YJR135W-A 264 nt0.41□□□□□ -2.34
HHO1P53551 YMR075C-AYMR075C-A 366 nt0.41□□□□□ -2.34
HHO1P53551 RPL42AYNL162W 321 nt0.41□□□□□ -2.34
HHO1P53551 YPR172WYPR172W 603 nt0.41□□□□□ -2.34
HHO1P53551 YSP1YHR155W 3687 nt0.41□□□□□ -2.34
HHO1P53551 HDA3YPR179C 1968 nt0.4□□□□□ -2.35
HHO1P53551 YDL032WYDL032W 312 nt0.4□□□□□ -2.35
HHO1P53551 GPX1YKL026C 504 nt0.4□□□□□ -2.35
HHO1P53551 UFE1YOR075W 1041 nt0.4□□□□□ -2.35
HHO1P53551 GEA2YEL022W 4380 nt0.4□□□□□ -2.35
HHO1P53551 15S_rRNA15S_rRNA 1649 nt0.39□□□□□ -2.35
HHO1P53551 RMD6YEL072W 696 nt0.39□□□□□ -2.35
HHO1P53551 ECM12YHR021W-A 456 nt0.39□□□□□ -2.35
HHO1P53551 CMS1YLR003C 876 nt0.39□□□□□ -2.35
HHO1P53551 RPS30AYLR287C-A 192 nt0.39□□□□□ -2.35
HHO1P53551 YMR158C-AYMR158C-A 138 nt0.39□□□□□ -2.35
HHO1P53551 DCP2YNL118C 2913 nt0.37□□□□□ -2.35
HHO1P53551 STO1YMR125W 2586 nt0.37□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms