Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
SH3TC1Q8TE82 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SH3TC1Q8TE82 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SH3TC1Q8TE82 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.45■■□□□ 1.66
SH3TC1Q8TE82 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SH3TC1Q8TE82 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.45■■□□□ 1.66
SH3TC1Q8TE82 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
SH3TC1Q8TE82 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 AC239809.2-201ENST00000415381 517 ntBASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 SNORA78-201ENST00000459373 127 ntBASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 Z98882.1-201ENST00000622160 2253 ntBASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
SH3TC1Q8TE82 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC25.43■■□□□ 1.66
SH3TC1Q8TE82 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
SH3TC1Q8TE82 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SH3TC1Q8TE82 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.42■■□□□ 1.66
SH3TC1Q8TE82 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SH3TC1Q8TE82 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SH3TC1Q8TE82 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SH3TC1Q8TE82 AC027702.1-201ENST00000563810 1770 ntBASIC25.42■■□□□ 1.66
SH3TC1Q8TE82 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SH3TC1Q8TE82 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 AC012618.2-201ENST00000428058 849 ntBASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
SH3TC1Q8TE82 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 AC233702.5-201ENST00000584107 538 ntBASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
SH3TC1Q8TE82 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SH3TC1Q8TE82 KRASP1-201ENST00000407852 552 ntBASIC25.39■■□□□ 1.66
SH3TC1Q8TE82 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SH3TC1Q8TE82 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.39■■□□□ 1.66
SH3TC1Q8TE82 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.39■■□□□ 1.66
SH3TC1Q8TE82 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SH3TC1Q8TE82 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SH3TC1Q8TE82 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SH3TC1Q8TE82 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
SH3TC1Q8TE82 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 RPS2P55-201ENST00000397318 883 ntBASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 AC107956.1-201ENST00000494359 873 ntBASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 AC110285.5-201ENST00000611501 352 ntBASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SH3TC1Q8TE82 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms