Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 tK(UUU)G2tK(UUU)G2 73 nt3.37□□□□□ -1.87
MSH6Q03834 tK(UUU)KtK(UUU)K 73 nt3.37□□□□□ -1.87
MSH6Q03834 tK(UUU)LtK(UUU)L 73 nt3.37□□□□□ -1.87
MSH6Q03834 tK(UUU)OtK(UUU)O 73 nt3.37□□□□□ -1.87
MSH6Q03834 tK(UUU)PtK(UUU)P 73 nt3.37□□□□□ -1.87
MSH6Q03834 YGL024WYGL024W 336 nt3.37□□□□□ -1.87
MSH6Q03834 BUD4YJR092W 4344 nt3.37□□□□□ -1.87
MSH6Q03834 RIX1YHR197W 2292 nt3.37□□□□□ -1.87
MSH6Q03834 GIN4YDR507C 3429 nt3.37□□□□□ -1.87
MSH6Q03834 MRP10YDL045W-A 288 nt3.36□□□□□ -1.87
MSH6Q03834 YEL014CYEL014C 306 nt3.36□□□□□ -1.87
MSH6Q03834 YIL059CYIL059C 366 nt3.36□□□□□ -1.87
MSH6Q03834 VPS55YJR044C 423 nt3.36□□□□□ -1.87
MSH6Q03834 YBL065WYBL065W 345 nt3.36□□□□□ -1.87
MSH6Q03834 HHT1YBR010W 411 nt3.36□□□□□ -1.87
MSH6Q03834 YPR063CYPR063C 423 nt3.36□□□□□ -1.87
MSH6Q03834 TRM2YKR056W 1920 nt3.36□□□□□ -1.87
MSH6Q03834 SNU114YKL173W 3027 nt3.36□□□□□ -1.87
MSH6Q03834 DUF1YOL087C 3351 nt3.35□□□□□ -1.87
MSH6Q03834 POM152YMR129W 4014 nt3.35□□□□□ -1.87
MSH6Q03834 YGR250CYGR250C 2346 nt3.35□□□□□ -1.87
MSH6Q03834 NPC2YDL046W 522 nt3.35□□□□□ -1.87
MSH6Q03834 DOT6YER088C 2013 nt3.35□□□□□ -1.87
MSH6Q03834 RRM3YHR031C 2172 nt3.35□□□□□ -1.87
MSH6Q03834 PUF4YGL014W 2667 nt3.35□□□□□ -1.87
MSH6Q03834 KEL2YGR238C 2649 nt3.34□□□□□ -1.87
MSH6Q03834 VTC1YER072W 390 nt3.34□□□□□ -1.87
MSH6Q03834 YLR154W-EYLR154W-E 204 nt3.34□□□□□ -1.87
MSH6Q03834 YBL053WYBL053W 375 nt3.34□□□□□ -1.87
MSH6Q03834 GOT1YMR292W 417 nt3.34□□□□□ -1.87
MSH6Q03834 CSR2YPR030W 3366 nt3.34□□□□□ -1.87
MSH6Q03834 STT4YLR305C 5703 nt3.33□□□□□ -1.88
MSH6Q03834 HDA3YPR179C 1968 nt3.33□□□□□ -1.88
MSH6Q03834 PAU10YDR542W 363 nt3.33□□□□□ -1.88
MSH6Q03834 PAU11YGL261C 363 nt3.33□□□□□ -1.88
MSH6Q03834 PAU4YLR461W 363 nt3.33□□□□□ -1.88
MSH6Q03834 BAS1YKR099W 2436 nt3.32□□□□□ -1.88
MSH6Q03834 YTA7YGR270W 4140 nt3.32□□□□□ -1.88
MSH6Q03834 YGL014C-AYGL014C-A 162 nt3.32□□□□□ -1.88
MSH6Q03834 YLR154C-HYLR154C-H 132 nt3.32□□□□□ -1.88
MSH6Q03834 YLR156C-AYLR156C-A 132 nt3.32□□□□□ -1.88
MSH6Q03834 YLR157C-CYLR157C-C 132 nt3.32□□□□□ -1.88
MSH6Q03834 YLR159C-AYLR159C-A 132 nt3.32□□□□□ -1.88
MSH6Q03834 SNQ2YDR011W 4506 nt3.32□□□□□ -1.88
MSH6Q03834 DFG16YOR030W 1860 nt3.32□□□□□ -1.88
MSH6Q03834 YOL057WYOL057W 2136 nt3.32□□□□□ -1.88
MSH6Q03834 YDL242WYDL242W 354 nt3.31□□□□□ -1.88
MSH6Q03834 YGL069CYGL069C 465 nt3.31□□□□□ -1.88
MSH6Q03834 RTC6YPL183W-A 282 nt3.31□□□□□ -1.88
MSH6Q03834 MDM20YOL076W 2391 nt3.31□□□□□ -1.88
MSH6Q03834 NCL1YBL024W 2055 nt3.31□□□□□ -1.88
MSH6Q03834 TAO3YIL129C 7131 nt3.31□□□□□ -1.88
MSH6Q03834 ORC2YBR060C 1863 nt3.3□□□□□ -1.88
MSH6Q03834 PHO2YDL106C 1680 nt3.3□□□□□ -1.88
MSH6Q03834 OLI1Q0130 231 nt3.3□□□□□ -1.88
MSH6Q03834 CHS2YBR038W 2892 nt3.3□□□□□ -1.88
MSH6Q03834 NPR3YHL023C 3441 nt3.3□□□□□ -1.88
MSH6Q03834 ROM1YGR070W 3468 nt3.29□□□□□ -1.88
MSH6Q03834 RLI1YDR091C 1827 nt3.29□□□□□ -1.88
MSH6Q03834 DYN2YDR424C 279 nt3.29□□□□□ -1.88
MSH6Q03834 PCC1YKR095W-A 267 nt3.29□□□□□ -1.88
MSH6Q03834 YNL028WYNL028W 318 nt3.29□□□□□ -1.88
MSH6Q03834 YJL070CYJL070C 2667 nt3.29□□□□□ -1.88
MSH6Q03834 IPT1YDR072C 1584 nt3.29□□□□□ -1.88
MSH6Q03834 AI5_ALPHAQ0070 1893 nt3.28□□□□□ -1.88
MSH6Q03834 POL2YNL262W 6669 nt3.28□□□□□ -1.88
MSH6Q03834 SMC2YFR031C 3513 nt3.28□□□□□ -1.88
MSH6Q03834 YDL025W-AYDL025W-A 105 nt3.28□□□□□ -1.88
MSH6Q03834 RPL38YLR325C 237 nt3.28□□□□□ -1.88
MSH6Q03834 YNL097C-BYNL097C-B 123 nt3.28□□□□□ -1.88
MSH6Q03834 CUL3YGR003W 2235 nt3.28□□□□□ -1.88
MSH6Q03834 MDM1YML104C 3384 nt3.28□□□□□ -1.89
MSH6Q03834 RPA190YOR341W 4995 nt3.28□□□□□ -1.89
MSH6Q03834 ENA5YDR038C 3276 nt3.27□□□□□ -1.89
MSH6Q03834 YDR426CYDR426C 378 nt3.27□□□□□ -1.89
MSH6Q03834 YML007C-AYML007C-A 111 nt3.27□□□□□ -1.89
MSH6Q03834 YOR015WYOR015W 360 nt3.27□□□□□ -1.89
MSH6Q03834 YOR329W-AYOR329W-A 210 nt3.27□□□□□ -1.89
MSH6Q03834 ALK2YBL009W 2031 nt3.27□□□□□ -1.89
MSH6Q03834 SGD1YLR336C 2700 nt3.27□□□□□ -1.89
MSH6Q03834 ORC1YML065W 2745 nt3.27□□□□□ -1.89
MSH6Q03834 YMR321CYMR321C 318 nt3.26□□□□□ -1.89
MSH6Q03834 LSM7YNL147W 348 nt3.26□□□□□ -1.89
MSH6Q03834 CSE2YNR010W 450 nt3.26□□□□□ -1.89
MSH6Q03834 FLO1YAR050W 4614 nt3.26□□□□□ -1.89
MSH6Q03834 PAN3YKL025C 2040 nt3.26□□□□□ -1.89
MSH6Q03834 PSY2YNL201C 2577 nt3.25□□□□□ -1.89
MSH6Q03834 MPH1YIR002C 2982 nt3.25□□□□□ -1.89
MSH6Q03834 FRE2YKL220C 2136 nt3.25□□□□□ -1.89
MSH6Q03834 YLR120W-AYLR120W-A 102 nt3.25□□□□□ -1.89
MSH6Q03834 UPS1YLR193C 528 nt3.25□□□□□ -1.89
MSH6Q03834 FPR1YNL135C 345 nt3.25□□□□□ -1.89
MSH6Q03834 CIN8YEL061C 3003 nt3.25□□□□□ -1.89
MSH6Q03834 POL3YDL102W 3294 nt3.25□□□□□ -1.89
MSH6Q03834 TOF2YKR010C 2316 nt3.25□□□□□ -1.89
MSH6Q03834 SPO14YKR031C 5052 nt3.25□□□□□ -1.89
MSH6Q03834 GUP1YGL084C 1683 nt3.24□□□□□ -1.89
MSH6Q03834 GRX8YLR364W 330 nt3.24□□□□□ -1.89
MSH6Q03834 YBR224WYBR224W 516 nt3.24□□□□□ -1.89
MSH6Q03834 snR46snR46 197 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 68.2 ms