Protein–RNA interactions for Protein: P40959

MVP1, Sorting nexin MVP1, yeastyeast

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVP1P40959 EMC1YCL045C 2283 nt4.04□□□□□ -1.76
MVP1P40959 snR61snR61 90 nt4.04□□□□□ -1.76
MVP1P40959 YHR032C-AYHR032C-A 120 nt4.04□□□□□ -1.76
MVP1P40959 RTC6YPL183W-A 282 nt4.04□□□□□ -1.76
MVP1P40959 VMA9YCL005W-A 222 nt4.04□□□□□ -1.76
MVP1P40959 NTO1YPR031W 2247 nt4.04□□□□□ -1.76
MVP1P40959 RLI1YDR091C 1827 nt4.04□□□□□ -1.76
MVP1P40959 ARO80YDR421W 2853 nt4.04□□□□□ -1.76
MVP1P40959 ASG1YIL130W 2895 nt4.04□□□□□ -1.76
MVP1P40959 SSQ1YLR369W 1974 nt4.03□□□□□ -1.76
MVP1P40959 VPH1YOR270C 2523 nt4.03□□□□□ -1.76
MVP1P40959 CHD1YER164W 4407 nt4.03□□□□□ -1.76
MVP1P40959 YGR051CYGR051C 324 nt4.03□□□□□ -1.76
MVP1P40959 POM152YMR129W 4014 nt4.03□□□□□ -1.76
MVP1P40959 INP2YMR163C 2118 nt4.01□□□□□ -1.77
MVP1P40959 MCM10YIL150C 1716 nt4.01□□□□□ -1.77
MVP1P40959 YAK1YJL141C 2424 nt4.01□□□□□ -1.77
MVP1P40959 SPT16YGL207W 3108 nt4.01□□□□□ -1.77
MVP1P40959 YHR071C-AYHR071C-A 321 nt4.01□□□□□ -1.77
MVP1P40959 YLR154W-AYLR154W-A 186 nt4.01□□□□□ -1.77
MVP1P40959 NUP120YKL057C 3114 nt4.01□□□□□ -1.77
MVP1P40959 RPO31YOR116C 4383 nt4□□□□□ -1.77
MVP1P40959 YBR225WYBR225W 2703 nt4□□□□□ -1.77
MVP1P40959 YDR182W-AYDR182W-A 204 nt4□□□□□ -1.77
MVP1P40959 SPT4YGR063C 309 nt4□□□□□ -1.77
MVP1P40959 YHL015W-AYHL015W-A 84 nt4□□□□□ -1.77
MVP1P40959 RPL25YOL127W 429 nt4□□□□□ -1.77
MVP1P40959 YJL070CYJL070C 2667 nt4□□□□□ -1.77
MVP1P40959 PTC5YOR090C 1719 nt4□□□□□ -1.77
MVP1P40959 RPL6AYML073C 531 nt3.99□□□□□ -1.77
MVP1P40959 YNL067W-BYNL067W-B 141 nt3.99□□□□□ -1.77
MVP1P40959 YOR345CYOR345C 351 nt3.99□□□□□ -1.77
MVP1P40959 XRN1YGL173C 4587 nt3.99□□□□□ -1.77
MVP1P40959 BMS1YPL217C 3552 nt3.98□□□□□ -1.77
MVP1P40959 YOR102WYOR102W 351 nt3.98□□□□□ -1.77
MVP1P40959 VPS3YDR495C 3036 nt3.98□□□□□ -1.77
MVP1P40959 CLN3YAL040C 1743 nt3.98□□□□□ -1.77
MVP1P40959 YDR210W-BYDR210W-B 5313 nt3.97□□□□□ -1.77
MVP1P40959 YDR261W-BYDR261W-B 5313 nt3.97□□□□□ -1.77
MVP1P40959 YFL002W-AYFL002W-A 5313 nt3.97□□□□□ -1.77
MVP1P40959 YGR161W-BYGR161W-B 5313 nt3.97□□□□□ -1.77
MVP1P40959 YLR410W-BYLR410W-B 5313 nt3.97□□□□□ -1.77
MVP1P40959 YCL019WYCL019W 5313 nt3.97□□□□□ -1.77
MVP1P40959 TFC8YPL007C 1767 nt3.97□□□□□ -1.77
MVP1P40959 tV(CAC)DtV(CAC)D 73 nt3.97□□□□□ -1.77
MVP1P40959 tV(CAC)HtV(CAC)H 73 nt3.97□□□□□ -1.77
MVP1P40959 YKL162C-AYKL162C-A 153 nt3.97□□□□□ -1.77
MVP1P40959 YBR099CYBR099C 384 nt3.97□□□□□ -1.77
MVP1P40959 MYO5YMR109W 3660 nt3.97□□□□□ -1.77
MVP1P40959 DBP7YKR024C 2229 nt3.97□□□□□ -1.77
MVP1P40959 DAN4YJR151C 3486 nt3.96□□□□□ -1.78
MVP1P40959 YGL014C-AYGL014C-A 162 nt3.96□□□□□ -1.78
MVP1P40959 LSM7YNL147W 348 nt3.96□□□□□ -1.78
MVP1P40959 ACM1YPL267W 630 nt3.96□□□□□ -1.78
MVP1P40959 YDR341CYDR341C 1824 nt3.95□□□□□ -1.78
MVP1P40959 ERB1YMR049C 2424 nt3.95□□□□□ -1.78
MVP1P40959 SMC3YJL074C 3693 nt3.95□□□□□ -1.78
MVP1P40959 ELG1YOR144C 2376 nt3.95□□□□□ -1.78
MVP1P40959 NOP4YPL043W 2058 nt3.95□□□□□ -1.78
MVP1P40959 YOR072W-BYOR072W-B 162 nt3.95□□□□□ -1.78
MVP1P40959 COY1YKL179C 2040 nt3.95□□□□□ -1.78
MVP1P40959 MCD4YKL165C 2760 nt3.95□□□□□ -1.78
MVP1P40959 RPN2YIL075C 2838 nt3.94□□□□□ -1.78
MVP1P40959 YBR221W-AYBR221W-A 105 nt3.94□□□□□ -1.78
MVP1P40959 SEG1YMR086W 2883 nt3.94□□□□□ -1.78
MVP1P40959 PUF4YGL014W 2667 nt3.94□□□□□ -1.78
MVP1P40959 MPT5YGL178W 2580 nt3.94□□□□□ -1.78
MVP1P40959 SIR3YLR442C 2937 nt3.94□□□□□ -1.78
MVP1P40959 MPH1YIR002C 2982 nt3.93□□□□□ -1.78
MVP1P40959 BOI1YBL085W 2943 nt3.93□□□□□ -1.78
MVP1P40959 YDR464C-AYDR464C-A 189 nt3.93□□□□□ -1.78
MVP1P40959 ITC1YGL133W 3795 nt3.93□□□□□ -1.78
MVP1P40959 TAF1YGR274C 3201 nt3.92□□□□□ -1.78
MVP1P40959 VPS53YJL029C 2469 nt3.92□□□□□ -1.78
MVP1P40959 TIM11YDR322C-A 291 nt3.92□□□□□ -1.78
MVP1P40959 EMC6YLL014W 327 nt3.92□□□□□ -1.78
MVP1P40959 GRX8YLR364W 330 nt3.92□□□□□ -1.78
MVP1P40959 RLM1YPL089C 2031 nt3.92□□□□□ -1.78
MVP1P40959 NOG1YPL093W 1944 nt3.91□□□□□ -1.78
MVP1P40959 YDL025W-AYDL025W-A 105 nt3.91□□□□□ -1.78
MVP1P40959 ANB1YJR047C 474 nt3.91□□□□□ -1.78
MVP1P40959 SAK1YER129W 3429 nt3.91□□□□□ -1.78
MVP1P40959 RSN1YMR266W 2862 nt3.9□□□□□ -1.78
MVP1P40959 RPO21YDL140C 5202 nt3.9□□□□□ -1.79
MVP1P40959 NAB3YPL190C 2409 nt3.9□□□□□ -1.79
MVP1P40959 SIZ1YDR409W 2715 nt3.89□□□□□ -1.79
MVP1P40959 VPS34YLR240W 2628 nt3.89□□□□□ -1.79
MVP1P40959 YER053C-AYER053C-A 114 nt3.89□□□□□ -1.79
MVP1P40959 YIL142C-AYIL142C-A 333 nt3.89□□□□□ -1.79
MVP1P40959 YLR146W-AYLR146W-A 189 nt3.89□□□□□ -1.79
MVP1P40959 NUP159YIL115C 4383 nt3.88□□□□□ -1.79
MVP1P40959 KAP95YLR347C 2586 nt3.88□□□□□ -1.79
MVP1P40959 YFL065CYFL065C 309 nt3.88□□□□□ -1.79
MVP1P40959 ORC1YML065W 2745 nt3.88□□□□□ -1.79
MVP1P40959 KRE5YOR336W 4098 nt3.88□□□□□ -1.79
MVP1P40959 YCR095W-AYCR095W-A 159 nt3.87□□□□□ -1.79
MVP1P40959 YGR050CYGR050C 357 nt3.87□□□□□ -1.79
MVP1P40959 snR43snR43 209 nt3.87□□□□□ -1.79
MVP1P40959 YLR149CYLR149C 2193 nt3.87□□□□□ -1.79
MVP1P40959 GRR1YJR090C 3456 nt3.86□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 50.5 ms