Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 CAF130YGR134W 3369 nt3.09□□□□□ -1.91
PUB1P32588 DFG16YOR030W 1860 nt3.09□□□□□ -1.91
PUB1P32588 STU2YLR045C 2667 nt3.09□□□□□ -1.91
PUB1P32588 SIP3YNL257C 3690 nt3.09□□□□□ -1.91
PUB1P32588 YGL024WYGL024W 336 nt3.09□□□□□ -1.91
PUB1P32588 COX23YHR116W 456 nt3.09□□□□□ -1.91
PUB1P32588 snR191snR191 274 nt3.09□□□□□ -1.91
PUB1P32588 VTC4YJL012C 2166 nt3.08□□□□□ -1.92 RIP-Chip
PUB1P32588 RAD2YGR258C 3096 nt3.08□□□□□ -1.92 RIP-Chip
PUB1P32588 YIR044CYIR044C 186 nt3.08□□□□□ -1.92 RIP-Chip
PUB1P32588 MIT1YEL007W 2001 nt3.08□□□□□ -1.92 RIP-Chip
PUB1P32588 KAR3YPR141C 2190 nt3.08□□□□□ -1.92
PUB1P32588 CDC20YGL116W 1833 nt3.07□□□□□ -1.92
PUB1P32588 RPS17BYDR447C 411 nt3.07□□□□□ -1.92
PUB1P32588 PRE4YFR050C 801 nt3.07□□□□□ -1.92 RIP-Chip
PUB1P32588 YHL015W-AYHL015W-A 84 nt3.07□□□□□ -1.92
PUB1P32588 RPS21AYKR057W 264 nt3.07□□□□□ -1.92
PUB1P32588 YOL019W-AYOL019W-A 153 nt3.07□□□□□ -1.92
PUB1P32588 CFT2YLR115W 2580 nt3.07□□□□□ -1.92
PUB1P32588 YEL043WYEL043W 2871 nt3.07□□□□□ -1.92
PUB1P32588 GUP1YGL084C 1683 nt3.07□□□□□ -1.92 RIP-Chip
PUB1P32588 PLC1YPL268W 2610 nt3.06□□□□□ -1.92
PUB1P32588 YCR095W-AYCR095W-A 159 nt3.06□□□□□ -1.92
PUB1P32588 COY1YKL179C 2040 nt3.06□□□□□ -1.92
PUB1P32588 YOR102WYOR102W 351 nt3.06□□□□□ -1.92
PUB1P32588 GCN1YGL195W 8019 nt3.05□□□□□ -1.92
PUB1P32588 SPT16YGL207W 3108 nt3.05□□□□□ -1.92
PUB1P32588 YDR193WYDR193W 399 nt3.05□□□□□ -1.92
PUB1P32588 COX14YML129C 213 nt3.05□□□□□ -1.92 RIP-Chip
PUB1P32588 RPA135YPR010C 3612 nt3.05□□□□□ -1.92
PUB1P32588 DOT6YER088C 2013 nt3.05□□□□□ -1.92
PUB1P32588 JEN1YKL217W 1851 nt3.05□□□□□ -1.92
PUB1P32588 DBP7YKR024C 2229 nt3.04□□□□□ -1.92
PUB1P32588 GLC3YEL011W 2115 nt3.04□□□□□ -1.92
PUB1P32588 RSM19YNR037C 276 nt3.04□□□□□ -1.92
PUB1P32588 YOR333CYOR333C 417 nt3.04□□□□□ -1.92
PUB1P32588 LRG1YDL240W 3054 nt3.04□□□□□ -1.92
PUB1P32588 SIR3YLR442C 2937 nt3.04□□□□□ -1.92
PUB1P32588 RSC1YGR056W 2787 nt3.04□□□□□ -1.92
PUB1P32588 RNR1YER070W 2667 nt3.04□□□□□ -1.92 RIP-Chip
PUB1P32588 VPS53YJL029C 2469 nt3.03□□□□□ -1.92
PUB1P32588 SNT1YCR033W 3681 nt3.03□□□□□ -1.92 RIP-Chip
PUB1P32588 CIN1YOR349W 3045 nt3.03□□□□□ -1.92
PUB1P32588 HEH2YDR458C 1992 nt3.03□□□□□ -1.92
PUB1P32588 VID27YNL212W 2349 nt3.03□□□□□ -1.92
PUB1P32588 EMC1YCL045C 2283 nt3.03□□□□□ -1.92 RIP-Chip
PUB1P32588 CLN3YAL040C 1743 nt3.02□□□□□ -1.93 RIP-Chip
PUB1P32588 ALK2YBL009W 2031 nt3.02□□□□□ -1.93
PUB1P32588 YDR182W-AYDR182W-A 204 nt3.02□□□□□ -1.93
PUB1P32588 YGL041C-BYGL041C-B 183 nt3.02□□□□□ -1.93
PUB1P32588 STT4YLR305C 5703 nt3.02□□□□□ -1.93 RIP-Chip
PUB1P32588 MPT5YGL178W 2580 nt3.02□□□□□ -1.93
PUB1P32588 PRP22YER013W 3438 nt3.02□□□□□ -1.93
PUB1P32588 RAD4YER162C 2265 nt3.02□□□□□ -1.93
PUB1P32588 TAF6YGL112C 1551 nt3.01□□□□□ -1.93
PUB1P32588 YLL066W-BYLL066W-B 171 nt3.01□□□□□ -1.93
PUB1P32588 YLR416CYLR416C 399 nt3.01□□□□□ -1.93
PUB1P32588 RPS23BYPR132W 438 nt3.01□□□□□ -1.93
PUB1P32588 YAK1YJL141C 2424 nt3.01□□□□□ -1.93
PUB1P32588 PAN3YKL025C 2040 nt3□□□□□ -1.93
PUB1P32588 SLM2YNL047C 1971 nt3□□□□□ -1.93
PUB1P32588 PWP2YCR057C 2772 nt3□□□□□ -1.93
PUB1P32588 EMP24YGL200C 612 nt3□□□□□ -1.93
PUB1P32588 YOR073W-AYOR073W-A 234 nt3□□□□□ -1.93
PUB1P32588 YOR218CYOR218C 420 nt3□□□□□ -1.93
PUB1P32588 COG3YER157W 2406 nt3□□□□□ -1.93
PUB1P32588 FAS1YKL182W 6156 nt3□□□□□ -1.93
PUB1P32588 YCG1YDR325W 3108 nt2.99□□□□□ -1.93
PUB1P32588 SIZ1YDR409W 2715 nt2.99□□□□□ -1.93
PUB1P32588 21S_rRNA21S_rRNA 3296 nt2.99□□□□□ -1.93
PUB1P32588 GIN4YDR507C 3429 nt2.99□□□□□ -1.93
PUB1P32588 YLR154W-AYLR154W-A 186 nt2.99□□□□□ -1.93
PUB1P32588 YBR277CYBR277C 402 nt2.99□□□□□ -1.93
PUB1P32588 REC8YPR007C 2043 nt2.98□□□□□ -1.93
PUB1P32588 APL4YPR029C 2499 nt2.98□□□□□ -1.93
PUB1P32588 RIX1YHR197W 2292 nt2.98□□□□□ -1.93
PUB1P32588 RTC6YPL183W-A 282 nt2.98□□□□□ -1.93 RIP-Chip
PUB1P32588 YSP2YDR326C 4317 nt2.98□□□□□ -1.93
PUB1P32588 REG1YDR028C 3045 nt2.98□□□□□ -1.93
PUB1P32588 BNI4YNL233W 2679 nt2.97□□□□□ -1.93
PUB1P32588 MCM10YIL150C 1716 nt2.97□□□□□ -1.93
PUB1P32588 RAM2YKL019W 951 nt2.97□□□□□ -1.93
PUB1P32588 RPL22AYLR061W 366 nt2.97□□□□□ -1.93
PUB1P32588 YBL065WYBL065W 345 nt2.97□□□□□ -1.93
PUB1P32588 RPL25YOL127W 429 nt2.97□□□□□ -1.93
PUB1P32588 PAA1YDR071C 576 nt2.96□□□□□ -1.94
PUB1P32588 YLR282CYLR282C 342 nt2.96□□□□□ -1.94
PUB1P32588 snR45snR45 172 nt2.96□□□□□ -1.94
PUB1P32588 CSR2YPR030W 3366 nt2.96□□□□□ -1.94
PUB1P32588 YJL070CYJL070C 2667 nt2.96□□□□□ -1.94
PUB1P32588 EFR3YMR212C 2349 nt2.95□□□□□ -1.94
PUB1P32588 MYO3YKL129C 3819 nt2.95□□□□□ -1.94 RIP-Chip
PUB1P32588 TIM12YBR091C 330 nt2.95□□□□□ -1.94
PUB1P32588 PUF4YGL014W 2667 nt2.95□□□□□ -1.94 RIP-Chip
PUB1P32588 PTC5YOR090C 1719 nt2.94□□□□□ -1.94
PUB1P32588 HEF3YNL014W 3135 nt2.94□□□□□ -1.94
PUB1P32588 MSH2YOL090W 2895 nt2.94□□□□□ -1.94
PUB1P32588 YOR072W-BYOR072W-B 162 nt2.94□□□□□ -1.94
PUB1P32588 RPB10YOR210W 213 nt2.94□□□□□ -1.94
PUB1P32588 CIN8YEL061C 3003 nt2.94□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 129.9 ms