Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 OSW7YFR039C 1533 nt2.37□□□□□ -2.03
TY2A-LR1P0C2J4 SNC1YAL030W 354 nt2.36□□□□□ -2.03
TY2A-LR1P0C2J4 YPL238CYPL238C 390 nt2.36□□□□□ -2.03
TY2A-LR1P0C2J4 snR43snR43 209 nt2.36□□□□□ -2.03
TY2A-LR1P0C2J4 FLO11YIR019C 4104 nt2.35□□□□□ -2.03
TY2A-LR1P0C2J4 YGL024WYGL024W 336 nt2.35□□□□□ -2.03
TY2A-LR1P0C2J4 RTT102YGR275W 474 nt2.35□□□□□ -2.03
TY2A-LR1P0C2J4 YOR055WYOR055W 435 nt2.35□□□□□ -2.03
TY2A-LR1P0C2J4 MMS22YLR320W 4365 nt2.35□□□□□ -2.03
TY2A-LR1P0C2J4 YDR209CYDR209C 414 nt2.34□□□□□ -2.03
TY2A-LR1P0C2J4 CDC53YDL132W 2448 nt2.34□□□□□ -2.03
TY2A-LR1P0C2J4 CRM1YGR218W 3255 nt2.34□□□□□ -2.04
TY2A-LR1P0C2J4 YPP1YGR198W 2454 nt2.33□□□□□ -2.04
TY2A-LR1P0C2J4 YIL156W-BYIL156W-B 222 nt2.33□□□□□ -2.04
TY2A-LR1P0C2J4 SMC6YLR383W 3345 nt2.33□□□□□ -2.04
TY2A-LR1P0C2J4 PHO91YNR013C 2685 nt2.33□□□□□ -2.04
TY2A-LR1P0C2J4 RIC1YLR039C 3171 nt2.33□□□□□ -2.04
TY2A-LR1P0C2J4 PAU14YIL176C 363 nt2.32□□□□□ -2.04
TY2A-LR1P0C2J4 PAU1YJL223C 363 nt2.32□□□□□ -2.04
TY2A-LR1P0C2J4 PAU8YAL068C 363 nt2.32□□□□□ -2.04
TY2A-LR1P0C2J4 PAU20YOL161C 363 nt2.32□□□□□ -2.04
TY2A-LR1P0C2J4 YOR121CYOR121C 306 nt2.32□□□□□ -2.04
TY2A-LR1P0C2J4 GPX2YBR244W 489 nt2.32□□□□□ -2.04
TY2A-LR1P0C2J4 RUD3YOR216C 1455 nt2.32□□□□□ -2.04
TY2A-LR1P0C2J4 PDR11YIL013C 4236 nt2.31□□□□□ -2.04
TY2A-LR1P0C2J4 VPS13YLL040C 9435 nt2.31□□□□□ -2.04
TY2A-LR1P0C2J4 PSD2YGR170W 3417 nt2.31□□□□□ -2.04
TY2A-LR1P0C2J4 YER079C-AYER079C-A 339 nt2.31□□□□□ -2.04
TY2A-LR1P0C2J4 YER137W-AYER137W-A 306 nt2.31□□□□□ -2.04
TY2A-LR1P0C2J4 VTI1YMR197C 654 nt2.31□□□□□ -2.04
TY2A-LR1P0C2J4 YPL182CYPL182C 384 nt2.31□□□□□ -2.04
TY2A-LR1P0C2J4 KEL2YGR238C 2649 nt2.31□□□□□ -2.04
TY2A-LR1P0C2J4 VPS41YDR080W 2979 nt2.3□□□□□ -2.04
TY2A-LR1P0C2J4 QCR7YDR529C 384 nt2.3□□□□□ -2.04
TY2A-LR1P0C2J4 YML009C-AYML009C-A 327 nt2.3□□□□□ -2.04
TY2A-LR1P0C2J4 ACM1YPL267W 630 nt2.3□□□□□ -2.04
TY2A-LR1P0C2J4 YDR239CYDR239C 2364 nt2.3□□□□□ -2.04
TY2A-LR1P0C2J4 MSB1YOR188W 3414 nt2.29□□□□□ -2.04
TY2A-LR1P0C2J4 SPO22YIL073C 2928 nt2.29□□□□□ -2.04
TY2A-LR1P0C2J4 UTP30YKR060W 825 nt2.29□□□□□ -2.04
TY2A-LR1P0C2J4 RPS17AYML024W 411 nt2.29□□□□□ -2.04
TY2A-LR1P0C2J4 YBR121C-AYBR121C-A 159 nt2.29□□□□□ -2.04
TY2A-LR1P0C2J4 CDC27YBL084C 2277 nt2.29□□□□□ -2.04
TY2A-LR1P0C2J4 TMN3YER113C 2121 nt2.29□□□□□ -2.04
TY2A-LR1P0C2J4 UBR1YGR184C 5853 nt2.29□□□□□ -2.04
TY2A-LR1P0C2J4 SCD5YOR329C 2619 nt2.28□□□□□ -2.04
TY2A-LR1P0C2J4 SGS1YMR190C 4344 nt2.28□□□□□ -2.04
TY2A-LR1P0C2J4 YGL069CYGL069C 465 nt2.28□□□□□ -2.04
TY2A-LR1P0C2J4 YLR154W-AYLR154W-A 186 nt2.28□□□□□ -2.04
TY2A-LR1P0C2J4 YMR194C-AYMR194C-A 225 nt2.28□□□□□ -2.04
TY2A-LR1P0C2J4 YOL159C-AYOL159C-A 273 nt2.28□□□□□ -2.04
TY2A-LR1P0C2J4 RPL36BYPL249C-A 303 nt2.28□□□□□ -2.04
TY2A-LR1P0C2J4 TRA1YHR099W 11235 nt2.28□□□□□ -2.04
TY2A-LR1P0C2J4 STE11YLR362W 2154 nt2.27□□□□□ -2.05
TY2A-LR1P0C2J4 DOT6YER088C 2013 nt2.27□□□□□ -2.05
TY2A-LR1P0C2J4 TUS1YLR425W 3924 nt2.27□□□□□ -2.05
TY2A-LR1P0C2J4 YDL011CYDL011C 324 nt2.27□□□□□ -2.05
TY2A-LR1P0C2J4 YAL063C-AYAL063C-A 291 nt2.27□□□□□ -2.05
TY2A-LR1P0C2J4 RPL9BYNL067W 576 nt2.27□□□□□ -2.05
TY2A-LR1P0C2J4 MET18YIL128W 3099 nt2.27□□□□□ -2.05
TY2A-LR1P0C2J4 SWR1YDR334W 4545 nt2.27□□□□□ -2.05
TY2A-LR1P0C2J4 SVL3YPL032C 2478 nt2.26□□□□□ -2.05
TY2A-LR1P0C2J4 YRB1YDR002W 606 nt2.26□□□□□ -2.05
TY2A-LR1P0C2J4 YGL239CYGL239C 315 nt2.26□□□□□ -2.05
TY2A-LR1P0C2J4 YLR154W-EYLR154W-E 204 nt2.26□□□□□ -2.05
TY2A-LR1P0C2J4 YNL058CYNL058C 951 nt2.26□□□□□ -2.05
TY2A-LR1P0C2J4 YPR197CYPR197C 564 nt2.26□□□□□ -2.05
TY2A-LR1P0C2J4 CLN3YAL040C 1743 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 SIR3YLR442C 2937 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 NOT5YPR072W 1683 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 SMY1YKL079W 1971 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 TIM9YEL020W-A 264 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 RTR1YER139C 681 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 YOR333CYOR333C 417 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 YBR224WYBR224W 516 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 YLR149CYLR149C 2193 nt2.25□□□□□ -2.05
TY2A-LR1P0C2J4 SGM1YJR134C 2124 nt2.24□□□□□ -2.05
TY2A-LR1P0C2J4 MGM1YOR211C 2646 nt2.24□□□□□ -2.05
TY2A-LR1P0C2J4 LYS9YNR050C 1341 nt2.24□□□□□ -2.05
TY2A-LR1P0C2J4 SCP160YJL080C 3669 nt2.24□□□□□ -2.05
TY2A-LR1P0C2J4 YBL005W-BYBL005W-B 5268 nt2.24□□□□□ -2.05
TY2A-LR1P0C2J4 YGR035CYGR035C 351 nt2.24□□□□□ -2.05
TY2A-LR1P0C2J4 YPR099CYPR099C 357 nt2.24□□□□□ -2.05
TY2A-LR1P0C2J4 MNL2YLR057W 2550 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 SNF5YBR289W 2718 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 NUP170YBL079W 4509 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 STB4YMR019W 2850 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 SCH9YHR205W 2475 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 PHO2YDL106C 1680 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 YDR286CYDR286C 345 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 HYP2YEL034W 474 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 YIL066W-AYIL066W-A 444 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 DAD3YBR233W-A 285 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 YEF3YLR249W 3135 nt2.23□□□□□ -2.05
TY2A-LR1P0C2J4 PEP3YLR148W 2757 nt2.22□□□□□ -2.05
TY2A-LR1P0C2J4 VTC3YPL019C 2508 nt2.22□□□□□ -2.05
TY2A-LR1P0C2J4 MNE1YOR350C 1992 nt2.22□□□□□ -2.05
TY2A-LR1P0C2J4 YBL108WYBL108W 306 nt2.22□□□□□ -2.05
TY2A-LR1P0C2J4 VMA9YCL005W-A 222 nt2.22□□□□□ -2.05
TY2A-LR1P0C2J4 RAV1YJR033C 4074 nt2.22□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 60.1 ms