Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC116050.2-201ENST00000612102 1779 ntBASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV23-1A0A0A0MS06 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC007322.3-201ENST00000426526 701 ntBASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 CDCA4P2-201ENST00000441182 718 ntBASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV23-1A0A0A0MS06 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV23-1A0A0A0MS06 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV23-1A0A0A0MS06 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV23-1A0A0A0MS06 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV23-1A0A0A0MS06 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV23-1A0A0A0MS06 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV23-1A0A0A0MS06 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC005181.1-201ENST00000604782 1256 ntBASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 FAM21FP-204ENST00000608637 956 ntBASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC008694.1-202ENST00000636953 945 ntBASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRBV23-1A0A0A0MS06 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 AC069236.1-201ENST00000604339 616 ntBASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 RAP2CP1-201ENST00000605103 478 ntBASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV23-1A0A0A0MS06 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV23-1A0A0A0MS06 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms