Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 tQ(UUG)BtQ(UUG)B 72 nt3.58□□□□□ -1.84
UFD2P54860 RPS21AYKR057W 264 nt3.58□□□□□ -1.84
UFD2P54860 YLR012CYLR012C 300 nt3.58□□□□□ -1.84
UFD2P54860 ASG1YIL130W 2895 nt3.57□□□□□ -1.84
UFD2P54860 YEL025CYEL025C 3567 nt3.57□□□□□ -1.84
UFD2P54860 NPR3YHL023C 3441 nt3.57□□□□□ -1.84
UFD2P54860 YJL182CYJL182C 318 nt3.57□□□□□ -1.84
UFD2P54860 RPL25YOL127W 429 nt3.57□□□□□ -1.84
UFD2P54860 YBR064WYBR064W 429 nt3.57□□□□□ -1.84
UFD2P54860 MIT1YEL007W 2001 nt3.56□□□□□ -1.84
UFD2P54860 FLO5YHR211W 3228 nt3.56□□□□□ -1.84
UFD2P54860 GCN1YGL195W 8019 nt3.56□□□□□ -1.84
UFD2P54860 YOL160WYOL160W 342 nt3.56□□□□□ -1.84
UFD2P54860 YLL032CYLL032C 2478 nt3.56□□□□□ -1.84
UFD2P54860 DIS3YOL021C 3006 nt3.55□□□□□ -1.84
UFD2P54860 QCR7YDR529C 384 nt3.55□□□□□ -1.84
UFD2P54860 YLR466C-BYLR466C-B 117 nt3.55□□□□□ -1.84
UFD2P54860 COG8YML071C 1824 nt3.55□□□□□ -1.84
UFD2P54860 YOL057WYOL057W 2136 nt3.55□□□□□ -1.84
UFD2P54860 EPL1YFL024C 2499 nt3.54□□□□□ -1.84
UFD2P54860 YAT2YER024W 2772 nt3.54□□□□□ -1.84
UFD2P54860 GCD6YDR211W 2139 nt3.54□□□□□ -1.84
UFD2P54860 YIL032CYIL032C 357 nt3.54□□□□□ -1.84
UFD2P54860 PFD1YJL179W 330 nt3.54□□□□□ -1.84
UFD2P54860 IES4YOR189W 351 nt3.54□□□□□ -1.84
UFD2P54860 PUF6YDR496C 1971 nt3.54□□□□□ -1.84
UFD2P54860 CHO2YGR157W 2610 nt3.54□□□□□ -1.84
UFD2P54860 BMS1YPL217C 3552 nt3.53□□□□□ -1.84
UFD2P54860 YER189WYER189W 369 nt3.53□□□□□ -1.84
UFD2P54860 USE1YGL098W 738 nt3.53□□□□□ -1.84
UFD2P54860 LSO2YGR169C-A 279 nt3.53□□□□□ -1.84
UFD2P54860 RPL36AYMR194W 303 nt3.53□□□□□ -1.84
UFD2P54860 HEF3YNL014W 3135 nt3.53□□□□□ -1.84
UFD2P54860 MET5YJR137C 4329 nt3.53□□□□□ -1.85
UFD2P54860 KAR3YPR141C 2190 nt3.52□□□□□ -1.85
UFD2P54860 GIN4YDR507C 3429 nt3.52□□□□□ -1.85
UFD2P54860 POL2YNL262W 6669 nt3.52□□□□□ -1.85
UFD2P54860 YDL242WYDL242W 354 nt3.52□□□□□ -1.85
UFD2P54860 YHL042WYHL042W 453 nt3.52□□□□□ -1.85
UFD2P54860 ITC1YGL133W 3795 nt3.52□□□□□ -1.85
UFD2P54860 NUP120YKL057C 3114 nt3.52□□□□□ -1.85
UFD2P54860 PUF4YGL014W 2667 nt3.51□□□□□ -1.85
UFD2P54860 YJL222W-BYJL222W-B 138 nt3.51□□□□□ -1.85
UFD2P54860 YLR053CYLR053C 327 nt3.51□□□□□ -1.85
UFD2P54860 SAR1YPL218W 573 nt3.51□□□□□ -1.85
UFD2P54860 PSK2YOL045W 3306 nt3.5□□□□□ -1.85
UFD2P54860 SOK1YDR006C 2706 nt3.5□□□□□ -1.85
UFD2P54860 YOR296WYOR296W 3870 nt3.5□□□□□ -1.85
UFD2P54860 CDC20YGL116W 1833 nt3.5□□□□□ -1.85
UFD2P54860 RPA34YJL148W 702 nt3.5□□□□□ -1.85
UFD2P54860 TRM2YKR056W 1920 nt3.5□□□□□ -1.85
UFD2P54860 POL3YDL102W 3294 nt3.5□□□□□ -1.85
UFD2P54860 RIM20YOR275C 1986 nt3.49□□□□□ -1.85
UFD2P54860 RIX1YHR197W 2292 nt3.49□□□□□ -1.85
UFD2P54860 SMC2YFR031C 3513 nt3.49□□□□□ -1.85
UFD2P54860 YGL024WYGL024W 336 nt3.49□□□□□ -1.85
UFD2P54860 YGR151CYGR151C 336 nt3.49□□□□□ -1.85
UFD2P54860 YHL041WYHL041W 450 nt3.49□□□□□ -1.85
UFD2P54860 YBL008W-AYBL008W-A 240 nt3.49□□□□□ -1.85
UFD2P54860 MRPL33YMR286W 261 nt3.49□□□□□ -1.85
UFD2P54860 YNL010WYNL010W 726 nt3.49□□□□□ -1.85
UFD2P54860 KAP95YLR347C 2586 nt3.49□□□□□ -1.85
UFD2P54860 YJL070CYJL070C 2667 nt3.48□□□□□ -1.85
UFD2P54860 IPT1YDR072C 1584 nt3.48□□□□□ -1.85
UFD2P54860 RGC1YPR115W 3252 nt3.48□□□□□ -1.85
UFD2P54860 FLO9YAL063C 3969 nt3.48□□□□□ -1.85
UFD2P54860 RBK1YCR036W 1002 nt3.48□□□□□ -1.85
UFD2P54860 PHS1YJL097W 654 nt3.48□□□□□ -1.85
UFD2P54860 MBB1YJL199C 327 nt3.48□□□□□ -1.85
UFD2P54860 RPS27AYKL156W 249 nt3.48□□□□□ -1.85
UFD2P54860 COA4YLR218C 453 nt3.48□□□□□ -1.85
UFD2P54860 YOR011W-AYOR011W-A 207 nt3.48□□□□□ -1.85
UFD2P54860 YAL064W-BYAL064W-B 381 nt3.47□□□□□ -1.85
UFD2P54860 YBR197CYBR197C 654 nt3.47□□□□□ -1.85
UFD2P54860 KEL2YGR238C 2649 nt3.46□□□□□ -1.86
UFD2P54860 ENA2YDR039C 3276 nt3.46□□□□□ -1.86
UFD2P54860 ENA1YDR040C 3276 nt3.46□□□□□ -1.86
UFD2P54860 snR55snR55 98 nt3.46□□□□□ -1.86
UFD2P54860 RLI1YDR091C 1827 nt3.46□□□□□ -1.86
UFD2P54860 YME2YMR302C 2553 nt3.46□□□□□ -1.86
UFD2P54860 SAK1YER129W 3429 nt3.45□□□□□ -1.86
UFD2P54860 NPR2YEL062W 1848 nt3.45□□□□□ -1.86
UFD2P54860 DLS1YJL065C 504 nt3.45□□□□□ -1.86
UFD2P54860 DUF1YOL087C 3351 nt3.45□□□□□ -1.86
UFD2P54860 MDM1YML104C 3384 nt3.45□□□□□ -1.86
UFD2P54860 ROG1YGL144C 2058 nt3.44□□□□□ -1.86
UFD2P54860 YGL069CYGL069C 465 nt3.44□□□□□ -1.86
UFD2P54860 YLR154W-EYLR154W-E 204 nt3.44□□□□□ -1.86
UFD2P54860 YMR230W-AYMR230W-A 189 nt3.44□□□□□ -1.86
UFD2P54860 LSM7YNL147W 348 nt3.44□□□□□ -1.86
UFD2P54860 HHT1YBR010W 411 nt3.44□□□□□ -1.86
UFD2P54860 RTC6YPL183W-A 282 nt3.44□□□□□ -1.86
UFD2P54860 NMD2YHR077C 3270 nt3.44□□□□□ -1.86
UFD2P54860 HEH2YDR458C 1992 nt3.43□□□□□ -1.86
UFD2P54860 SOK2YMR016C 2358 nt3.43□□□□□ -1.86
UFD2P54860 ATP8Q0080 147 nt3.43□□□□□ -1.86
UFD2P54860 YGL014C-AYGL014C-A 162 nt3.43□□□□□ -1.86
UFD2P54860 YIL059CYIL059C 366 nt3.43□□□□□ -1.86
UFD2P54860 YMR172C-AYMR172C-A 384 nt3.43□□□□□ -1.86
UFD2P54860 YPR063CYPR063C 423 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 191.9 ms