Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 FEM1AP4-201ENST00000443167 1987 ntBASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 AL049796.1-201ENST00000565336 1766 ntBASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TRBV23-1A0A0A0MS06 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC007322.1-201ENST00000426983 750 ntBASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 CDV3P1-201ENST00000471403 739 ntBASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRBV23-1A0A0A0MS06 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 AL591742.1-201ENST00000604433 565 ntBASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC073111.5-205ENST00000641717 521 ntBASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV23-1A0A0A0MS06 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC091799.1-201ENST00000422823 811 ntBASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRBV23-1A0A0A0MS06 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 CNN2P6-201ENST00000439038 900 ntBASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC026185.1-201ENST00000445748 174 ntBASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV23-1A0A0A0MS06 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms