Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.15■□□□□ 0.98
HAPLN3Q96S86 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.14■□□□□ 0.98
HAPLN3Q96S86 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.14■□□□□ 0.98
HAPLN3Q96S86 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HAPLN3Q96S86 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HAPLN3Q96S86 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
HAPLN3Q96S86 KRT8P36-201ENST00000489121 1440 ntBASIC21.13■□□□□ 0.97
HAPLN3Q96S86 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HAPLN3Q96S86 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HAPLN3Q96S86 AL355472.2-201ENST00000422958 438 ntBASIC21.13■□□□□ 0.97
HAPLN3Q96S86 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.13■□□□□ 0.97
HAPLN3Q96S86 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.13■□□□□ 0.97
HAPLN3Q96S86 AL356652.1-201ENST00000615962 565 ntBASIC21.13■□□□□ 0.97
HAPLN3Q96S86 AL109923.1-201ENST00000618799 583 ntBASIC21.13■□□□□ 0.97
HAPLN3Q96S86 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HAPLN3Q96S86 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HAPLN3Q96S86 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
HAPLN3Q96S86 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 FP700111.2-201ENST00000619190 1892 ntBASIC21.12■□□□□ 0.97
HAPLN3Q96S86 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 SLC29A4P1-201ENST00000398760 971 ntBASIC21.12■□□□□ 0.97
HAPLN3Q96S86 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 AC104771.1-201ENST00000603335 964 ntBASIC21.12■□□□□ 0.97
HAPLN3Q96S86 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HAPLN3Q96S86 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 ID1-201ENST00000376105 1233 ntBASIC21.11■□□□□ 0.97
HAPLN3Q96S86 MIPEPP3-201ENST00000412105 444 ntBASIC21.11■□□□□ 0.97
HAPLN3Q96S86 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 AL589743.5-201ENST00000616611 1050 ntBASIC21.11■□□□□ 0.97
HAPLN3Q96S86 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
HAPLN3Q96S86 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 BX276092.2-201ENST00000417668 665 ntBASIC21.1■□□□□ 0.97
HAPLN3Q96S86 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HAPLN3Q96S86 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms