Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.5■■□□□ 1.19
COL1A2P08123 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
COL1A2P08123 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.5■■□□□ 1.19
COL1A2P08123 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
COL1A2P08123 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.5■■□□□ 1.19
COL1A2P08123 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.5■■□□□ 1.19
COL1A2P08123 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.5■■□□□ 1.19
COL1A2P08123 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.5■■□□□ 1.19
COL1A2P08123 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL1A2P08123 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL1A2P08123 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
COL1A2P08123 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.5■■□□□ 1.19
COL1A2P08123 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
COL1A2P08123 AL390719.1-204ENST00000412397 1219 ntBASIC22.5■■□□□ 1.19
COL1A2P08123 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
COL1A2P08123 AC233263.1-201ENST00000578059 224 ntBASIC22.5■■□□□ 1.19
COL1A2P08123 RN7SL471P-201ENST00000580476 299 ntBASIC22.5■■□□□ 1.19
COL1A2P08123 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22.5■■□□□ 1.19
COL1A2P08123 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A2P08123 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
COL1A2P08123 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.49■■□□□ 1.19
COL1A2P08123 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A2P08123 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.49■■□□□ 1.19
COL1A2P08123 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A2P08123 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A2P08123 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
COL1A2P08123 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
COL1A2P08123 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.49■■□□□ 1.19
COL1A2P08123 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A2P08123 FEM1AP4-201ENST00000443167 1987 ntBASIC22.49■■□□□ 1.19
COL1A2P08123 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A2P08123 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
COL1A2P08123 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.49■■□□□ 1.19
COL1A2P08123 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.49■■□□□ 1.19
COL1A2P08123 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A2P08123 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
COL1A2P08123 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL1A2P08123 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.48■■□□□ 1.19
COL1A2P08123 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
COL1A2P08123 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.48■■□□□ 1.19
COL1A2P08123 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.48■■□□□ 1.19
COL1A2P08123 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.48■■□□□ 1.19
COL1A2P08123 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL1A2P08123 RPPH1-201ENST00000516869 333 ntBASIC22.48■■□□□ 1.19
COL1A2P08123 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.48■■□□□ 1.19
COL1A2P08123 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.48■■□□□ 1.19
COL1A2P08123 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
COL1A2P08123 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
COL1A2P08123 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
COL1A2P08123 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COL1A2P08123 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 UBE2SP1-201ENST00000450587 669 ntBASIC22.47■■□□□ 1.19
COL1A2P08123 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.47■■□□□ 1.19
COL1A2P08123 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
COL1A2P08123 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COL1A2P08123 AC120498.8-201ENST00000614275 531 ntBASIC22.47■■□□□ 1.19
COL1A2P08123 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.47■■□□□ 1.19
COL1A2P08123 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.47■■□□□ 1.19
COL1A2P08123 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.19
COL1A2P08123 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COL1A2P08123 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.47■■□□□ 1.19
COL1A2P08123 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL1A2P08123 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.46■■□□□ 1.19
COL1A2P08123 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
COL1A2P08123 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL1A2P08123 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.46■■□□□ 1.19
COL1A2P08123 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms