Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 MRH1YDR033W 963 nt3.02□□□□□ -1.93
RFX1P48743 YDR366CYDR366C 399 nt3.02□□□□□ -1.93
RFX1P48743 YDR413CYDR413C 576 nt3.02□□□□□ -1.93
RFX1P48743 YER107W-AYER107W-A 321 nt3.02□□□□□ -1.93
RFX1P48743 YLR012CYLR012C 300 nt3.02□□□□□ -1.93
RFX1P48743 YAF9YNL107W 681 nt3.02□□□□□ -1.93
RFX1P48743 SNX41YDR425W 1878 nt3.02□□□□□ -1.93
RFX1P48743 SPP382YLR424W 2127 nt3.02□□□□□ -1.93
RFX1P48743 DBP10YDL031W 2988 nt3.02□□□□□ -1.93
RFX1P48743 YIL169CYIL169C 2988 nt3.02□□□□□ -1.93
RFX1P48743 ROM1YGR070W 3468 nt3.02□□□□□ -1.93
RFX1P48743 ECM21YBL101C 3354 nt3.01□□□□□ -1.93
RFX1P48743 tC(GCA)BtC(GCA)B 72 nt3.01□□□□□ -1.93
RFX1P48743 tC(GCA)GtC(GCA)G 72 nt3.01□□□□□ -1.93
RFX1P48743 tC(GCA)P1tC(GCA)P1 72 nt3.01□□□□□ -1.93
RFX1P48743 tC(GCA)P2tC(GCA)P2 72 nt3.01□□□□□ -1.93
RFX1P48743 GPI8YDR331W 1236 nt3.01□□□□□ -1.93
RFX1P48743 YHL006W-AYHL006W-A 354 nt3.01□□□□□ -1.93
RFX1P48743 FYV4YHR059W 393 nt3.01□□□□□ -1.93
RFX1P48743 RPL6AYML073C 531 nt3.01□□□□□ -1.93
RFX1P48743 YPR014CYPR014C 330 nt3.01□□□□□ -1.93
RFX1P48743 DBP7YKR024C 2229 nt3.01□□□□□ -1.93
RFX1P48743 SIP3YNL257C 3690 nt3.01□□□□□ -1.93
RFX1P48743 SWT1YOR166C 1377 nt3□□□□□ -1.93
RFX1P48743 DYN1YKR054C 12279 nt3□□□□□ -1.93
RFX1P48743 YLR154C-HYLR154C-H 132 nt3□□□□□ -1.93
RFX1P48743 YLR156C-AYLR156C-A 132 nt3□□□□□ -1.93
RFX1P48743 YLR157C-CYLR157C-C 132 nt3□□□□□ -1.93
RFX1P48743 YLR159C-AYLR159C-A 132 nt3□□□□□ -1.93
RFX1P48743 SMA2YML066C 1110 nt3□□□□□ -1.93
RFX1P48743 YMR158W-BYMR158W-B 321 nt3□□□□□ -1.93
RFX1P48743 YBL108WYBL108W 306 nt3□□□□□ -1.93
RFX1P48743 BIL1YOR304C-A 231 nt3□□□□□ -1.93
RFX1P48743 ROG1YGL144C 2058 nt3□□□□□ -1.93
RFX1P48743 NPR1YNL183C 2373 nt3□□□□□ -1.93
RFX1P48743 ESL1YIL151C 3357 nt2.99□□□□□ -1.93
RFX1P48743 MSB2YGR014W 3921 nt2.99□□□□□ -1.93
RFX1P48743 KAP104YBR017C 2757 nt2.99□□□□□ -1.93
RFX1P48743 SSY1YDR160W 2559 nt2.99□□□□□ -1.93
RFX1P48743 YER097WYER097W 330 nt2.99□□□□□ -1.93
RFX1P48743 TFC4YGR047C 3078 nt2.99□□□□□ -1.93
RFX1P48743 FLO1YAR050W 4614 nt2.99□□□□□ -1.93
RFX1P48743 snR65snR65 100 nt2.98□□□□□ -1.93
RFX1P48743 HMF1YER057C 390 nt2.98□□□□□ -1.93
RFX1P48743 tT(UGU)Q1tT(UGU)Q1 76 nt2.98□□□□□ -1.93
RFX1P48743 TIM8YJR135W-A 264 nt2.98□□□□□ -1.93
RFX1P48743 PRE8YML092C 753 nt2.98□□□□□ -1.93
RFX1P48743 SSN8YNL025C 972 nt2.98□□□□□ -1.93
RFX1P48743 YOR282WYOR282W 321 nt2.98□□□□□ -1.93
RFX1P48743 ATP3YBR039W 936 nt2.98□□□□□ -1.93
RFX1P48743 YPL238CYPL238C 390 nt2.98□□□□□ -1.93
RFX1P48743 INP52YNL106C 3552 nt2.98□□□□□ -1.93
RFX1P48743 FUN30YAL019W 3396 nt2.98□□□□□ -1.93
RFX1P48743 PMR1YGL167C 2853 nt2.98□□□□□ -1.93
RFX1P48743 YLR278CYLR278C 4026 nt2.97□□□□□ -1.93
RFX1P48743 ILS1YBL076C 3219 nt2.97□□□□□ -1.93
RFX1P48743 YDR210W-BYDR210W-B 5313 nt2.97□□□□□ -1.93
RFX1P48743 YDR261W-BYDR261W-B 5313 nt2.97□□□□□ -1.93
RFX1P48743 YFL002W-AYFL002W-A 5313 nt2.97□□□□□ -1.93
RFX1P48743 YGR161W-BYGR161W-B 5313 nt2.97□□□□□ -1.93
RFX1P48743 YLR410W-BYLR410W-B 5313 nt2.97□□□□□ -1.93
RFX1P48743 YCL019WYCL019W 5313 nt2.97□□□□□ -1.93
RFX1P48743 BAT1YHR208W 1182 nt2.97□□□□□ -1.93
RFX1P48743 YAR053WYAR053W 297 nt2.97□□□□□ -1.93
RFX1P48743 AIM32YML050W 936 nt2.97□□□□□ -1.93
RFX1P48743 NDD1YOR372C 1665 nt2.97□□□□□ -1.93
RFX1P48743 MET5YJR137C 4329 nt2.97□□□□□ -1.93
RFX1P48743 YPL216WYPL216W 3309 nt2.97□□□□□ -1.93
RFX1P48743 BNA4YBL098W 1383 nt2.97□□□□□ -1.93
RFX1P48743 LEU3YLR451W 2661 nt2.96□□□□□ -1.93
RFX1P48743 SLH1YGR271W 5904 nt2.96□□□□□ -1.94
RFX1P48743 MAK21YDR060W 3078 nt2.96□□□□□ -1.94
RFX1P48743 DIA2YOR080W 2199 nt2.96□□□□□ -1.94
RFX1P48743 TOM1YDR457W 9807 nt2.96□□□□□ -1.94
RFX1P48743 YDR250CYDR250C 276 nt2.96□□□□□ -1.94
RFX1P48743 HPA3YEL066W 540 nt2.96□□□□□ -1.94
RFX1P48743 RPL23BYER117W 414 nt2.96□□□□□ -1.94
RFX1P48743 URM1YIL008W 300 nt2.96□□□□□ -1.94
RFX1P48743 YNL043CYNL043C 321 nt2.96□□□□□ -1.94
RFX1P48743 ESF2YNR054C 951 nt2.96□□□□□ -1.94
RFX1P48743 YNL034WYNL034W 1839 nt2.96□□□□□ -1.94
RFX1P48743 YDR102CYDR102C 333 nt2.95□□□□□ -1.94
RFX1P48743 ECM5YMR176W 4236 nt2.95□□□□□ -1.94
RFX1P48743 EXO84YBR102C 2262 nt2.95□□□□□ -1.94
RFX1P48743 COG3YER157W 2406 nt2.94□□□□□ -1.94
RFX1P48743 ITC1YGL133W 3795 nt2.94□□□□□ -1.94
RFX1P48743 RPS17BYDR447C 411 nt2.94□□□□□ -1.94
RFX1P48743 YIL058WYIL058W 285 nt2.94□□□□□ -1.94
RFX1P48743 MSL1YIR009W 336 nt2.94□□□□□ -1.94
RFX1P48743 YKL033W-AYKL033W-A 711 nt2.94□□□□□ -1.94
RFX1P48743 RPL8BYLL045C 771 nt2.94□□□□□ -1.94
RFX1P48743 TIM18YOR297C 579 nt2.94□□□□□ -1.94
RFX1P48743 RIX1YHR197W 2292 nt2.93□□□□□ -1.94
RFX1P48743 YJL016WYJL016W 1686 nt2.93□□□□□ -1.94
RFX1P48743 AST2YER101C 1293 nt2.93□□□□□ -1.94
RFX1P48743 YMR31YFR049W 372 nt2.93□□□□□ -1.94
RFX1P48743 EGD1YPL037C 474 nt2.93□□□□□ -1.94
RFX1P48743 RPL33AYPL143W 324 nt2.93□□□□□ -1.94
RFX1P48743 FUS1YCL027W 1539 nt2.93□□□□□ -1.94
RFX1P48743 BCH1YMR237W 2175 nt2.93□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 84.7 ms