Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.56■■□□□ 1.2
COL1A2P08123 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A2P08123 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.56■■□□□ 1.2
COL1A2P08123 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.56■■□□□ 1.2
COL1A2P08123 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL1A2P08123 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL1A2P08123 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.56■■□□□ 1.2
COL1A2P08123 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.56■■□□□ 1.2
COL1A2P08123 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.55■■□□□ 1.2
COL1A2P08123 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.55■■□□□ 1.2
COL1A2P08123 POM121L13P-201ENST00000422362 380 ntBASIC22.55■■□□□ 1.2
COL1A2P08123 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL1A2P08123 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.55■■□□□ 1.2
COL1A2P08123 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.55■■□□□ 1.2
COL1A2P08123 AC005829.2-201ENST00000571422 1056 ntBASIC22.55■■□□□ 1.2
COL1A2P08123 AC069544.1-201ENST00000609399 999 ntBASIC22.55■■□□□ 1.2
COL1A2P08123 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.55■■□□□ 1.2
COL1A2P08123 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.55■■□□□ 1.2
COL1A2P08123 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.55■■□□□ 1.2
COL1A2P08123 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL1A2P08123 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.55■■□□□ 1.2
COL1A2P08123 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL1A2P08123 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A2P08123 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A2P08123 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.54■■□□□ 1.2
COL1A2P08123 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A2P08123 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A2P08123 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A2P08123 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A2P08123 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.54■■□□□ 1.2
COL1A2P08123 AL158047.1-201ENST00000445918 881 ntBASIC22.54■■□□□ 1.2
COL1A2P08123 KRT8P36-201ENST00000489121 1440 ntBASIC22.54■■□□□ 1.2
COL1A2P08123 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
COL1A2P08123 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.54■■□□□ 1.2
COL1A2P08123 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
COL1A2P08123 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL1A2P08123 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
COL1A2P08123 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.54■■□□□ 1.2
COL1A2P08123 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
COL1A2P08123 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.53■■□□□ 1.2
COL1A2P08123 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
COL1A2P08123 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.53■■□□□ 1.2
COL1A2P08123 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.53■■□□□ 1.2
COL1A2P08123 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.53■■□□□ 1.2
COL1A2P08123 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.53■■□□□ 1.2
COL1A2P08123 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL1A2P08123 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.53■■□□□ 1.2
COL1A2P08123 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL1A2P08123 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL1A2P08123 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL1A2P08123 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.52■■□□□ 1.2
COL1A2P08123 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A2P08123 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
COL1A2P08123 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.52■■□□□ 1.2
COL1A2P08123 AP006294.2-201ENST00000641667 209 ntBASIC22.52■■□□□ 1.2
COL1A2P08123 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.52■■□□□ 1.2
COL1A2P08123 AC121338.2-201ENST00000622535 1744 ntBASIC22.52■■□□□ 1.2
COL1A2P08123 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL1A2P08123 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A2P08123 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.52■■□□□ 1.2
COL1A2P08123 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL1A2P08123 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
COL1A2P08123 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A2P08123 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.51■■□□□ 1.19
COL1A2P08123 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
COL1A2P08123 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A2P08123 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
COL1A2P08123 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.51■■□□□ 1.19
COL1A2P08123 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
COL1A2P08123 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.51■■□□□ 1.19
COL1A2P08123 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.51■■□□□ 1.19
COL1A2P08123 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.51■■□□□ 1.19
COL1A2P08123 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.51■■□□□ 1.19
COL1A2P08123 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
COL1A2P08123 AL359736.2-201ENST00000621992 437 ntBASIC22.51■■□□□ 1.19
COL1A2P08123 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A2P08123 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
COL1A2P08123 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A2P08123 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A2P08123 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
COL1A2P08123 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL1A2P08123 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms