Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 CTF18YMR078C 2226 nt1.2□□□□□ -2.22
TY1B-HO13535 WHI3YNL197C 1986 nt1.2□□□□□ -2.22
TY1B-HO13535 PCL2YDL127W 927 nt1.19□□□□□ -2.22
TY1B-HO13535 CRD1YDL142C 852 nt1.19□□□□□ -2.22
TY1B-HO13535 HLR1YDR528W 1272 nt1.19□□□□□ -2.22
TY1B-HO13535 YER189WYER189W 369 nt1.19□□□□□ -2.22
TY1B-HO13535 BAG7YOR134W 1230 nt1.19□□□□□ -2.22
TY1B-HO13535 UBC5YDR059C 447 nt1.19□□□□□ -2.22
TY1B-HO13535 YLR379WYLR379W 375 nt1.19□□□□□ -2.22
TY1B-HO13535 BET5YML077W 480 nt1.19□□□□□ -2.22
TY1B-HO13535 YPL238CYPL238C 390 nt1.19□□□□□ -2.22
TY1B-HO13535 TAN1YGL232W 870 nt1.18□□□□□ -2.22
TY1B-HO13535 CKA1YIL035C 1119 nt1.18□□□□□ -2.22
TY1B-HO13535 PEP8YJL053W 1140 nt1.18□□□□□ -2.22
TY1B-HO13535 YLR140WYLR140W 327 nt1.18□□□□□ -2.22
TY1B-HO13535 YNL114CYNL114C 372 nt1.18□□□□□ -2.22
TY1B-HO13535 FUS1YCL027W 1539 nt1.18□□□□□ -2.22
TY1B-HO13535 BIT61YJL058C 1632 nt1.17□□□□□ -2.22
TY1B-HO13535 SHR3YDL212W 633 nt1.17□□□□□ -2.22
TY1B-HO13535 RPL37BYDR500C 267 nt1.17□□□□□ -2.22
TY1B-HO13535 ARI1YGL157W 1044 nt1.17□□□□□ -2.22
TY1B-HO13535 YJL133C-AYJL133C-A 225 nt1.17□□□□□ -2.22
TY1B-HO13535 PLM2YDR501W 1566 nt1.17□□□□□ -2.22
TY1B-HO13535 PRK1YIL095W 2433 nt1.17□□□□□ -2.22
TY1B-HO13535 CET1YPL228W 1650 nt1.16□□□□□ -2.22
TY1B-HO13535 RPA12YJR063W 378 nt1.16□□□□□ -2.22
TY1B-HO13535 MTG1YMR097C 1104 nt1.16□□□□□ -2.22
TY1B-HO13535 OST2YOR103C 393 nt1.16□□□□□ -2.22
TY1B-HO13535 GAL7YBR018C 1101 nt1.16□□□□□ -2.22
TY1B-HO13535 UAF30YOR295W 687 nt1.16□□□□□ -2.22
TY1B-HO13535 ECM11YDR446W 909 nt1.16□□□□□ -2.22
TY1B-HO13535 YEL009C-AYEL009C-A 408 nt1.16□□□□□ -2.22
TY1B-HO13535 COBQ0105 1158 nt1.16□□□□□ -2.22
TY1B-HO13535 YGL242CYGL242C 546 nt1.16□□□□□ -2.22
TY1B-HO13535 LTP1YPR073C 486 nt1.16□□□□□ -2.22
TY1B-HO13535 DPB3YBR278W 606 nt1.16□□□□□ -2.22
TY1B-HO13535 TRS65YGR166W 1683 nt1.15□□□□□ -2.22
TY1B-HO13535 IRA2YOL081W 9240 nt1.15□□□□□ -2.23
TY1B-HO13535 SNF5YBR289W 2718 nt1.15□□□□□ -2.23
TY1B-HO13535 RPL31AYDL075W 342 nt1.15□□□□□ -2.23
TY1B-HO13535 YDR018CYDR018C 1191 nt1.15□□□□□ -2.23
TY1B-HO13535 YGR114CYGR114C 390 nt1.15□□□□□ -2.23
TY1B-HO13535 YKL145W-AYKL145W-A 93 nt1.15□□□□□ -2.23
TY1B-HO13535 IAH1YOR126C 717 nt1.15□□□□□ -2.23
TY1B-HO13535 PRM4YPL156C 855 nt1.15□□□□□ -2.23
TY1B-HO13535 VID24YBR105C 1089 nt1.15□□□□□ -2.23
TY1B-HO13535 EAF1YDR359C 2949 nt1.15□□□□□ -2.23
TY1B-HO13535 MLH3YPL164C 2148 nt1.15□□□□□ -2.23
TY1B-HO13535 REX3YLR107W 1215 nt1.14□□□□□ -2.23
TY1B-HO13535 RAD9YDR217C 3930 nt1.14□□□□□ -2.23
TY1B-HO13535 YBL083CYBL083C 426 nt1.13□□□□□ -2.23
TY1B-HO13535 YOR093CYOR093C 4947 nt1.13□□□□□ -2.23
TY1B-HO13535 MUB1YMR100W 1863 nt1.13□□□□□ -2.23
TY1B-HO13535 PBP4YDL053C 558 nt1.13□□□□□ -2.23
TY1B-HO13535 MRP49YKL167C 414 nt1.13□□□□□ -2.23
TY1B-HO13535 NYV1YLR093C 762 nt1.13□□□□□ -2.23
TY1B-HO13535 MSS11YMR164C 2277 nt1.13□□□□□ -2.23
TY1B-HO13535 ASG1YIL130W 2895 nt1.12□□□□□ -2.23
TY1B-HO13535 YMR147WYMR147W 672 nt1.12□□□□□ -2.23
TY1B-HO13535 YMR181CYMR181C 465 nt1.12□□□□□ -2.23
TY1B-HO13535 MNE1YOR350C 1992 nt1.12□□□□□ -2.23
TY1B-HO13535 RRG1YDR065W 1098 nt1.11□□□□□ -2.23
TY1B-HO13535 BNA7YDR428C 786 nt1.11□□□□□ -2.23
TY1B-HO13535 RPS26BYER131W 360 nt1.11□□□□□ -2.23
TY1B-HO13535 YGR204C-AYGR204C-A 114 nt1.11□□□□□ -2.23
TY1B-HO13535 EPT1YHR123W 1176 nt1.11□□□□□ -2.23
TY1B-HO13535 YJL169WYJL169W 369 nt1.11□□□□□ -2.23
TY1B-HO13535 RPS10AYOR293W 318 nt1.11□□□□□ -2.23
TY1B-HO13535 SPC29YPL124W 762 nt1.11□□□□□ -2.23
TY1B-HO13535 YCS4YLR272C 3531 nt1.11□□□□□ -2.23
TY1B-HO13535 CDC36YDL165W 576 nt1.11□□□□□ -2.23
TY1B-HO13535 URM1YIL008W 300 nt1.11□□□□□ -2.23
TY1B-HO13535 RRT15YLR162W-A 189 nt1.11□□□□□ -2.23
TY1B-HO13535 HSE1YHL002W 1359 nt1.11□□□□□ -2.23
TY1B-HO13535 BST1YFL025C 3090 nt1.1□□□□□ -2.23
TY1B-HO13535 YDL026WYDL026W 312 nt1.1□□□□□ -2.23
TY1B-HO13535 YGL138CYGL138C 1038 nt1.1□□□□□ -2.23
TY1B-HO13535 YNL284C-AYNL284C-A 1323 nt1.1□□□□□ -2.23
TY1B-HO13535 YBR012W-AYBR012W-A 1323 nt1.1□□□□□ -2.23
TY1B-HO13535 YOR142W-AYOR142W-A 1323 nt1.1□□□□□ -2.23
TY1B-HO13535 PEX27YOR193W 1131 nt1.1□□□□□ -2.23
TY1B-HO13535 YPR158W-AYPR158W-A 1323 nt1.1□□□□□ -2.23
TY1B-HO13535 BTT1YDR252W 450 nt1.09□□□□□ -2.23
TY1B-HO13535 MFA2YNL145W 117 nt1.09□□□□□ -2.23
TY1B-HO13535 JJJ2YJL162C 1752 nt1.09□□□□□ -2.24
TY1B-HO13535 ESC2YDR363W 1371 nt1.09□□□□□ -2.24
TY1B-HO13535 ARK1YNL020C 1917 nt1.08□□□□□ -2.24
TY1B-HO13535 DIG2YDR480W 972 nt1.08□□□□□ -2.24
TY1B-HO13535 MMS2YGL087C 414 nt1.08□□□□□ -2.24
TY1B-HO13535 YLR225CYLR225C 1224 nt1.08□□□□□ -2.24
TY1B-HO13535 TOA1YOR194C 861 nt1.08□□□□□ -2.24
TY1B-HO13535 EST2YLR318W 2655 nt1.08□□□□□ -2.24
TY1B-HO13535 PAF1YBR279W 1338 nt1.08□□□□□ -2.24
TY1B-HO13535 YIL082WYIL082W 873 nt1.08□□□□□ -2.24
TY1B-HO13535 SUI2YJR007W 915 nt1.08□□□□□ -2.24
TY1B-HO13535 SNC1YAL030W 354 nt1.08□□□□□ -2.24
TY1B-HO13535 CTL1YMR180C 963 nt1.08□□□□□ -2.24
TY1B-HO13535 YPR145C-AYPR145C-A 237 nt1.08□□□□□ -2.24
TY1B-HO13535 YBR277CYBR277C 402 nt1.08□□□□□ -2.24
TY1B-HO13535 SEC63YOR254C 1992 nt1.07□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms