Protein–RNA interactions for Protein: P53840

TOF1, Topoisomerase 1-associated factor 1, yeastyeast

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOF1P53840 RRT1YBL048W 312 nt2.6□□□□□ -1.99
TOF1P53840 PHO80YOL001W 882 nt2.6□□□□□ -1.99
TOF1P53840 COG3YER157W 2406 nt2.6□□□□□ -1.99
TOF1P53840 SVL3YPL032C 2478 nt2.59□□□□□ -1.99
TOF1P53840 YDR199WYDR199W 366 nt2.59□□□□□ -1.99
TOF1P53840 VPS74YDR372C 1038 nt2.59□□□□□ -1.99
TOF1P53840 YDR537CYDR537C 606 nt2.59□□□□□ -1.99
TOF1P53840 PAU14YIL176C 363 nt2.59□□□□□ -1.99
TOF1P53840 PAU1YJL223C 363 nt2.59□□□□□ -1.99
TOF1P53840 BET3YKR068C 582 nt2.59□□□□□ -1.99
TOF1P53840 PIS1YPR113W 663 nt2.59□□□□□ -1.99
TOF1P53840 FAR11YNL127W 2862 nt2.59□□□□□ -1.99
TOF1P53840 KAR9YPL269W 1935 nt2.59□□□□□ -1.99
TOF1P53840 PCK1YKR097W 1650 nt2.59□□□□□ -2
TOF1P53840 YKR078WYKR078W 1758 nt2.59□□□□□ -2
TOF1P53840 RGL1YPL066W 1440 nt2.59□□□□□ -2
TOF1P53840 SIP3YNL257C 3690 nt2.58□□□□□ -2
TOF1P53840 SNU56YDR240C 1479 nt2.58□□□□□ -2
TOF1P53840 PUF4YGL014W 2667 nt2.58□□□□□ -2
TOF1P53840 SDC25YLL016W 3147 nt2.58□□□□□ -2
TOF1P53840 SWA2YDR320C 2007 nt2.58□□□□□ -2
TOF1P53840 TMA64YDR117C 1698 nt2.58□□□□□ -2
TOF1P53840 YCR064CYCR064C 411 nt2.58□□□□□ -2
TOF1P53840 YER079C-AYER079C-A 339 nt2.58□□□□□ -2
TOF1P53840 YIR020CYIR020C 303 nt2.58□□□□□ -2
TOF1P53840 SGM1YJR134C 2124 nt2.58□□□□□ -2
TOF1P53840 YMR194C-AYMR194C-A 225 nt2.58□□□□□ -2
TOF1P53840 ESF2YNR054C 951 nt2.58□□□□□ -2
TOF1P53840 YPL205CYPL205C 345 nt2.58□□□□□ -2
TOF1P53840 SSP1YHR184W 1716 nt2.58□□□□□ -2
TOF1P53840 ALY1YKR021W 2748 nt2.58□□□□□ -2
TOF1P53840 ORC2YBR060C 1863 nt2.58□□□□□ -2
TOF1P53840 SCP160YJL080C 3669 nt2.57□□□□□ -2
TOF1P53840 VPS13YLL040C 9435 nt2.57□□□□□ -2
TOF1P53840 NPR3YHL023C 3441 nt2.57□□□□□ -2
TOF1P53840 HMRA1YCR097W 381 nt2.57□□□□□ -2
TOF1P53840 HYP2YEL034W 474 nt2.57□□□□□ -2
TOF1P53840 YER189WYER189W 369 nt2.57□□□□□ -2
TOF1P53840 YGR053CYGR053C 852 nt2.57□□□□□ -2
TOF1P53840 RTS3YGR161C 792 nt2.57□□□□□ -2
TOF1P53840 YJL007CYJL007C 315 nt2.57□□□□□ -2
TOF1P53840 YLR252WYLR252W 306 nt2.57□□□□□ -2
TOF1P53840 COX8YLR395C 237 nt2.57□□□□□ -2
TOF1P53840 SAS2YMR127C 1017 nt2.57□□□□□ -2
TOF1P53840 YBL108WYBL108W 306 nt2.57□□□□□ -2
TOF1P53840 BFR1YOR198C 1413 nt2.57□□□□□ -2
TOF1P53840 OSW7YFR039C 1533 nt2.57□□□□□ -2
TOF1P53840 TOR1YJR066W 7413 nt2.56□□□□□ -2
TOF1P53840 YER091C-AYER091C-A 222 nt2.56□□□□□ -2
TOF1P53840 VPS51YKR020W 495 nt2.56□□□□□ -2
TOF1P53840 ATX2YOR079C 942 nt2.56□□□□□ -2
TOF1P53840 DAL5YJR152W 1632 nt2.56□□□□□ -2
TOF1P53840 SGS1YMR190C 4344 nt2.56□□□□□ -2
TOF1P53840 MLH1YMR167W 2310 nt2.56□□□□□ -2
TOF1P53840 PSD2YGR170W 3417 nt2.55□□□□□ -2
TOF1P53840 HMLALPHA2YCL067C 633 nt2.55□□□□□ -2
TOF1P53840 MATALPHA2YCR039C 633 nt2.55□□□□□ -2
TOF1P53840 TPS2YDR074W 2691 nt2.55□□□□□ -2
TOF1P53840 IRC2YDR112W 309 nt2.55□□□□□ -2
TOF1P53840 BAS1YKR099W 2436 nt2.55□□□□□ -2
TOF1P53840 SIR3YLR442C 2937 nt2.55□□□□□ -2
TOF1P53840 KTI11YBL071W-A 249 nt2.55□□□□□ -2
TOF1P53840 SFM1YOR021C 642 nt2.55□□□□□ -2
TOF1P53840 SPF1YEL031W 3648 nt2.55□□□□□ -2
TOF1P53840 PSK2YOL045W 3306 nt2.55□□□□□ -2
TOF1P53840 RRI2YOL117W 1938 nt2.54□□□□□ -2
TOF1P53840 KRE33YNL132W 3171 nt2.54□□□□□ -2
TOF1P53840 YCR090CYCR090C 549 nt2.54□□□□□ -2
TOF1P53840 AAD16YFL057C 459 nt2.54□□□□□ -2
TOF1P53840 RPL9AYGL147C 576 nt2.54□□□□□ -2
TOF1P53840 RPL16AYIL133C 600 nt2.54□□□□□ -2
TOF1P53840 YLR264C-AYLR264C-A 117 nt2.54□□□□□ -2
TOF1P53840 YOR169CYOR169C 465 nt2.54□□□□□ -2
TOF1P53840 YPR096CYPR096C 303 nt2.54□□□□□ -2
TOF1P53840 YRR1YOR162C 2433 nt2.54□□□□□ -2
TOF1P53840 NPR1YNL183C 2373 nt2.54□□□□□ -2
TOF1P53840 SCD5YOR329C 2619 nt2.54□□□□□ -2
TOF1P53840 APL5YPL195W 2799 nt2.53□□□□□ -2
TOF1P53840 YOR192C-AYOR192C-A 1317 nt2.53□□□□□ -2
TOF1P53840 YGR042WYGR042W 816 nt2.53□□□□□ -2
TOF1P53840 YGR050CYGR050C 357 nt2.53□□□□□ -2
TOF1P53840 RNP1YLL046C 750 nt2.53□□□□□ -2
TOF1P53840 AFB1YLR040C 675 nt2.53□□□□□ -2
TOF1P53840 SYM1YLR251W 594 nt2.53□□□□□ -2
TOF1P53840 RGM1YMR182C 636 nt2.53□□□□□ -2
TOF1P53840 YMR304C-AYMR304C-A 351 nt2.53□□□□□ -2
TOF1P53840 YNL018CYNL018C 1839 nt2.53□□□□□ -2
TOF1P53840 MES1YGR264C 2256 nt2.53□□□□□ -2
TOF1P53840 EDS1YBR033W 2760 nt2.53□□□□□ -2
TOF1P53840 ASM4YDL088C 1587 nt2.53□□□□□ -2.01
TOF1P53840 SAK1YER129W 3429 nt2.52□□□□□ -2.01
TOF1P53840 HOS4YIL112W 3252 nt2.52□□□□□ -2.01
TOF1P53840 CSF1YLR087C 8877 nt2.52□□□□□ -2.01
TOF1P53840 GPI19YDR437W 423 nt2.52□□□□□ -2.01
TOF1P53840 YJL202CYJL202C 348 nt2.52□□□□□ -2.01
TOF1P53840 YAL026C-AYAL026C-A 438 nt2.52□□□□□ -2.01
TOF1P53840 YAL042C-AYAL042C-A 378 nt2.52□□□□□ -2.01
TOF1P53840 YMR013C-AYMR013C-A 150 nt2.52□□□□□ -2.01
TOF1P53840 YMR173W-AYMR173W-A 1185 nt2.52□□□□□ -2.01
TOF1P53840 PHO2YDL106C 1680 nt2.52□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 51.6 ms