Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 PEX17YNL214W 600 nt3.05□□□□□ -1.92
SSM4P40318 HSP10YOR020C 321 nt3.05□□□□□ -1.92
SSM4P40318 YPL068CYPL068C 882 nt3.05□□□□□ -1.92
SSM4P40318 DAL5YJR152W 1632 nt3.05□□□□□ -1.92
SSM4P40318 SAP185YJL098W 3177 nt3.05□□□□□ -1.92
SSM4P40318 PEP1YBL017C 4740 nt3.05□□□□□ -1.92
SSM4P40318 NET1YJL076W 3570 nt3.04□□□□□ -1.92
SSM4P40318 NUM1YDR150W 8247 nt3.04□□□□□ -1.92
SSM4P40318 TAE2YPL009C 3117 nt3.04□□□□□ -1.92
SSM4P40318 EMP24YGL200C 612 nt3.04□□□□□ -1.92
SSM4P40318 YHL006W-AYHL006W-A 354 nt3.04□□□□□ -1.92
SSM4P40318 YLR202CYLR202C 327 nt3.04□□□□□ -1.92
SSM4P40318 OST2YOR103C 393 nt3.04□□□□□ -1.92
SSM4P40318 JID1YPR061C 906 nt3.04□□□□□ -1.92
SSM4P40318 TRS20YBR254C 528 nt3.04□□□□□ -1.92
SSM4P40318 SPF1YEL031W 3648 nt3.04□□□□□ -1.92
SSM4P40318 RRI2YOL117W 1938 nt3.03□□□□□ -1.92
SSM4P40318 FUS1YCL027W 1539 nt3.03□□□□□ -1.92
SSM4P40318 HRD3YLR207W 2502 nt3.03□□□□□ -1.92
SSM4P40318 FYV4YHR059W 393 nt3.03□□□□□ -1.92
SSM4P40318 YIL068W-AYIL068W-A 384 nt3.03□□□□□ -1.92
SSM4P40318 SPP41YDR464W 4308 nt3.03□□□□□ -1.92
SSM4P40318 YOR343W-AYOR343W-A 1317 nt3.03□□□□□ -1.92
SSM4P40318 SPR3YGR059W 1539 nt3.02□□□□□ -1.93
SSM4P40318 MET6YER091C 2304 nt3.02□□□□□ -1.93
SSM4P40318 GPI19YDR437W 423 nt3.02□□□□□ -1.93
SSM4P40318 BER1YLR412W 825 nt3.02□□□□□ -1.93
SSM4P40318 YNR034W-AYNR034W-A 297 nt3.02□□□□□ -1.93
SSM4P40318 YOL013W-BYOL013W-B 291 nt3.02□□□□□ -1.93
SSM4P40318 CWC22YGR278W 1734 nt3.02□□□□□ -1.93
SSM4P40318 MTC7YEL033W 420 nt3.01□□□□□ -1.93
SSM4P40318 YMR013C-AYMR013C-A 150 nt3.01□□□□□ -1.93
SSM4P40318 UBX4YMR067C 1251 nt3.01□□□□□ -1.93
SSM4P40318 YPR096CYPR096C 303 nt3.01□□□□□ -1.93
SSM4P40318 COG3YER157W 2406 nt3.01□□□□□ -1.93
SSM4P40318 TRM2YKR056W 1920 nt3.01□□□□□ -1.93
SSM4P40318 RLF2YPR018W 1821 nt3.01□□□□□ -1.93
SSM4P40318 ICR1ICR1 3199 nt3□□□□□ -1.93
SSM4P40318 DFG10YIL049W 762 nt3□□□□□ -1.93
SSM4P40318 IST3YIR005W 447 nt3□□□□□ -1.93
SSM4P40318 YNR021WYNR021W 1215 nt3□□□□□ -1.93
SSM4P40318 YOL150CYOL150C 312 nt3□□□□□ -1.93
SSM4P40318 NEO1YIL048W 3456 nt3□□□□□ -1.93
SSM4P40318 GDI1YER136W 1356 nt3□□□□□ -1.93
SSM4P40318 SSF1YHR066W 1362 nt3□□□□□ -1.93
SSM4P40318 SUL1YBR294W 2580 nt3□□□□□ -1.93
SSM4P40318 SNF12YNR023W 1701 nt2.99□□□□□ -1.93
SSM4P40318 UBP16YPL072W 1500 nt2.99□□□□□ -1.93
SSM4P40318 MET32YDR253C 576 nt2.99□□□□□ -1.93
SSM4P40318 NYV1YLR093C 762 nt2.99□□□□□ -1.93
SSM4P40318 HRI1YLR301W 735 nt2.99□□□□□ -1.93
SSM4P40318 NUP170YBL079W 4509 nt2.99□□□□□ -1.93
SSM4P40318 OTU2YHL013C 924 nt2.98□□□□□ -1.93
SSM4P40318 AFB1YLR040C 675 nt2.98□□□□□ -1.93
SSM4P40318 HHT2YNL031C 411 nt2.98□□□□□ -1.93
SSM4P40318 PEP12YOR036W 867 nt2.98□□□□□ -1.93
SSM4P40318 YPL034WYPL034W 498 nt2.98□□□□□ -1.93
SSM4P40318 BI4Q0120 1917 nt2.98□□□□□ -1.93
SSM4P40318 CIC1YHR052W 1131 nt2.97□□□□□ -1.93
SSM4P40318 YLR302CYLR302C 363 nt2.97□□□□□ -1.93
SSM4P40318 PHO80YOL001W 882 nt2.97□□□□□ -1.93
SSM4P40318 ARR2YPR200C 393 nt2.97□□□□□ -1.93
SSM4P40318 UBP15YMR304W 3693 nt2.97□□□□□ -1.93
SSM4P40318 SSY1YDR160W 2559 nt2.97□□□□□ -1.93
SSM4P40318 FRE2YKL220C 2136 nt2.97□□□□□ -1.93
SSM4P40318 SSN2YDR443C 4263 nt2.96□□□□□ -1.93
SSM4P40318 YCR081C-AYCR081C-A 237 nt2.96□□□□□ -1.93
SSM4P40318 ADK1YDR226W 669 nt2.96□□□□□ -1.93
SSM4P40318 YGL015CYGL015C 393 nt2.96□□□□□ -1.93
SSM4P40318 PRM8YGL053W 714 nt2.96□□□□□ -1.93
SSM4P40318 NOP19YGR251W 591 nt2.96□□□□□ -1.93
SSM4P40318 TOM1YDR457W 9807 nt2.96□□□□□ -1.94
SSM4P40318 SSF2YDR312W 1362 nt2.96□□□□□ -1.94
SSM4P40318 RRP12YPL012W 3687 nt2.96□□□□□ -1.94
SSM4P40318 NPR1YNL183C 2373 nt2.96□□□□□ -1.94
SSM4P40318 PHR1YOR386W 1698 nt2.96□□□□□ -1.94
SSM4P40318 NDT80YHR124W 1884 nt2.96□□□□□ -1.94
SSM4P40318 ESC1YMR219W 4977 nt2.95□□□□□ -1.94
SSM4P40318 SSD1YDR293C 3753 nt2.95□□□□□ -1.94
SSM4P40318 YDR509WYDR509W 348 nt2.95□□□□□ -1.94
SSM4P40318 EAF6YJR082C 342 nt2.95□□□□□ -1.94
SSM4P40318 YHC1YLR298C 696 nt2.95□□□□□ -1.94
SSM4P40318 ESF2YNR054C 951 nt2.95□□□□□ -1.94
SSM4P40318 FIR1YER032W 2631 nt2.95□□□□□ -1.94
SSM4P40318 DUG2YBR281C 2637 nt2.95□□□□□ -1.94
SSM4P40318 GYP5YPL249C 2685 nt2.95□□□□□ -1.94
SSM4P40318 GIS1YDR096W 2685 nt2.95□□□□□ -1.94
SSM4P40318 PUF4YGL014W 2667 nt2.95□□□□□ -1.94
SSM4P40318 YDR199WYDR199W 366 nt2.94□□□□□ -1.94
SSM4P40318 RPS17BYDR447C 411 nt2.94□□□□□ -1.94
SSM4P40318 SPO13YHR014W 876 nt2.94□□□□□ -1.94
SSM4P40318 TIF35YDR429C 825 nt2.93□□□□□ -1.94
SSM4P40318 HPA3YEL066W 540 nt2.93□□□□□ -1.94
SSM4P40318 RPL29YFR032C-A 180 nt2.93□□□□□ -1.94
SSM4P40318 YNL046WYNL046W 519 nt2.93□□□□□ -1.94
SSM4P40318 UBP2YOR124C 3819 nt2.93□□□□□ -1.94
SSM4P40318 UTP14YML093W 2700 nt2.93□□□□□ -1.94
SSM4P40318 AHC2YCR082W 387 nt2.93□□□□□ -1.94
SSM4P40318 YKL044WYKL044W 321 nt2.93□□□□□ -1.94
SSM4P40318 ARV1YLR242C 966 nt2.93□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 212.4 ms