Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 SLC7A5P2-201ENST00000553010 536 ntBASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV23-1A0A0A0MS06 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 BID-214ENST00000617586 542 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRBV23-1A0A0A0MS06 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV23-1A0A0A0MS06 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV23-1A0A0A0MS06 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV23-1A0A0A0MS06 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.27■□□□□ 0.35
TRBV23-1A0A0A0MS06 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV23-1A0A0A0MS06 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV23-1A0A0A0MS06 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV23-1A0A0A0MS06 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC026310.3-201ENST00000625186 2373 ntBASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC243732.1-201ENST00000612648 864 ntBASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV23-1A0A0A0MS06 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV23-1A0A0A0MS06 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV23-1A0A0A0MS06 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms