Protein–RNA interactions for Protein: P33417

IXR1, Intrastrand cross-link recognition protein, yeastyeast

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IXR1P33417 FRQ1YDR373W 573 nt4.56□□□□□ -1.68
IXR1P33417 RPL14BYHL001W 417 nt4.56□□□□□ -1.68
IXR1P33417 FBP1YLR377C 1047 nt4.56□□□□□ -1.68
IXR1P33417 YNL010WYNL010W 726 nt4.56□□□□□ -1.68
IXR1P33417 COX1Q0045 1605 nt4.56□□□□□ -1.68
IXR1P33417 YDR061WYDR061W 1620 nt4.56□□□□□ -1.68
IXR1P33417 SEC9YGR009C 1956 nt4.56□□□□□ -1.68
IXR1P33417 PEX5YDR244W 1839 nt4.56□□□□□ -1.68
IXR1P33417 YHR078WYHR078W 1659 nt4.55□□□□□ -1.68
IXR1P33417 DAL81YIR023W 2913 nt4.55□□□□□ -1.68
IXR1P33417 CWH43YCR017C 2862 nt4.55□□□□□ -1.68
IXR1P33417 YDL011CYDL011C 324 nt4.55□□□□□ -1.68
IXR1P33417 YJR023CYJR023C 402 nt4.55□□□□□ -1.68
IXR1P33417 VPS55YJR044C 423 nt4.55□□□□□ -1.68
IXR1P33417 HTB2YBL002W 396 nt4.55□□□□□ -1.68
IXR1P33417 SHH3YMR118C 591 nt4.55□□□□□ -1.68
IXR1P33417 ECM25YJL201W 1800 nt4.55□□□□□ -1.68
IXR1P33417 CRT10YOL063C 2874 nt4.55□□□□□ -1.68
IXR1P33417 DPB11YJL090C 2295 nt4.55□□□□□ -1.68
IXR1P33417 DNM1YLL001W 2274 nt4.55□□□□□ -1.68
IXR1P33417 HBT1YDL223C 3141 nt4.55□□□□□ -1.68
IXR1P33417 ELM1YKL048C 1923 nt4.54□□□□□ -1.68
IXR1P33417 DBF4YDR052C 2115 nt4.54□□□□□ -1.68
IXR1P33417 RDN5-1RDN5-1 121 nt4.54□□□□□ -1.68
IXR1P33417 RDN5-6RDN5-6 121 nt4.54□□□□□ -1.68
IXR1P33417 RPS22BYLR367W 393 nt4.54□□□□□ -1.68
IXR1P33417 PSE1YMR308C 3270 nt4.54□□□□□ -1.68
IXR1P33417 PRM15YMR278W 1869 nt4.54□□□□□ -1.68
IXR1P33417 snR7-SsnR7-S 179 nt4.53□□□□□ -1.68
IXR1P33417 PAU2YEL049W 363 nt4.53□□□□□ -1.68
IXR1P33417 RPL34AYER056C-A 366 nt4.53□□□□□ -1.68
IXR1P33417 YGR269WYGR269W 327 nt4.53□□□□□ -1.68
IXR1P33417 RPL34BYIL052C 366 nt4.53□□□□□ -1.68
IXR1P33417 ALO1YML086C 1581 nt4.53□□□□□ -1.69
IXR1P33417 SRB4YER022W 2064 nt4.52□□□□□ -1.69
IXR1P33417 tC(GCA)BtC(GCA)B 72 nt4.52□□□□□ -1.69
IXR1P33417 tC(GCA)GtC(GCA)G 72 nt4.52□□□□□ -1.69
IXR1P33417 tC(GCA)P1tC(GCA)P1 72 nt4.52□□□□□ -1.69
IXR1P33417 tC(GCA)P2tC(GCA)P2 72 nt4.52□□□□□ -1.69
IXR1P33417 RAD27YKL113C 1149 nt4.52□□□□□ -1.69
IXR1P33417 YLR154W-EYLR154W-E 204 nt4.52□□□□□ -1.69
IXR1P33417 TAF7YMR227C 1773 nt4.52□□□□□ -1.69
IXR1P33417 OCA5YHL029C 2040 nt4.51□□□□□ -1.69
IXR1P33417 ARF1YDL192W 546 nt4.51□□□□□ -1.69
IXR1P33417 BUD5YCR038C 1929 nt4.5□□□□□ -1.69
IXR1P33417 ARG2YJL071W 1725 nt4.5□□□□□ -1.69
IXR1P33417 ARG5,6YER069W 2592 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)CtK(CUU)C 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)D1tK(CUU)D1 73 nt4.5□□□□□ -1.69
IXR1P33417 VTC1YER072W 390 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)D2tK(CUU)D2 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)E1tK(CUU)E1 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)E2tK(CUU)E2 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)FtK(CUU)F 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)G1tK(CUU)G1 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)G2tK(CUU)G2 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)G3tK(CUU)G3 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)ItK(CUU)I 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)JtK(CUU)J 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)KtK(CUU)K 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)MtK(CUU)M 73 nt4.5□□□□□ -1.69
IXR1P33417 tK(CUU)PtK(CUU)P 73 nt4.5□□□□□ -1.69
IXR1P33417 YKL162C-AYKL162C-A 153 nt4.5□□□□□ -1.69
IXR1P33417 YBL053WYBL053W 375 nt4.5□□□□□ -1.69
IXR1P33417 YER077CYER077C 2067 nt4.5□□□□□ -1.69
IXR1P33417 IMH1YLR309C 2736 nt4.5□□□□□ -1.69
IXR1P33417 SSH1YBR283C 1473 nt4.49□□□□□ -1.69
IXR1P33417 PDS5YMR076C 3834 nt4.49□□□□□ -1.69
IXR1P33417 MRP10YDL045W-A 288 nt4.49□□□□□ -1.69
IXR1P33417 tQ(UUG)CtQ(UUG)C 72 nt4.49□□□□□ -1.69
IXR1P33417 tQ(UUG)D1tQ(UUG)D1 72 nt4.49□□□□□ -1.69
IXR1P33417 tQ(UUG)D2tQ(UUG)D2 72 nt4.49□□□□□ -1.69
IXR1P33417 tQ(UUG)D3tQ(UUG)D3 72 nt4.49□□□□□ -1.69
IXR1P33417 tQ(UUG)E1tQ(UUG)E1 72 nt4.49□□□□□ -1.69
IXR1P33417 tQ(UUG)HtQ(UUG)H 72 nt4.49□□□□□ -1.69
IXR1P33417 tQ(UUG)LtQ(UUG)L 72 nt4.49□□□□□ -1.69
IXR1P33417 MES1YGR264C 2256 nt4.48□□□□□ -1.69
IXR1P33417 tF(GAA)QtF(GAA)Q 75 nt4.48□□□□□ -1.69
IXR1P33417 NHX1YDR456W 1902 nt4.48□□□□□ -1.69
IXR1P33417 RAD16YBR114W 2373 nt4.48□□□□□ -1.69
IXR1P33417 NAT1YDL040C 2565 nt4.48□□□□□ -1.69
IXR1P33417 SOK2YMR016C 2358 nt4.47□□□□□ -1.69
IXR1P33417 NAN1YPL126W 2691 nt4.47□□□□□ -1.69
IXR1P33417 YDR250CYDR250C 276 nt4.47□□□□□ -1.69
IXR1P33417 YEL045CYEL045C 426 nt4.47□□□□□ -1.69
IXR1P33417 SWD3YBR175W 948 nt4.47□□□□□ -1.69
IXR1P33417 GAL4YPL248C 2646 nt4.47□□□□□ -1.69
IXR1P33417 MSC7YHR039C 1935 nt4.46□□□□□ -1.69
IXR1P33417 HFA1YMR207C 6372 nt4.46□□□□□ -1.69
IXR1P33417 CWH41YGL027C 2502 nt4.46□□□□□ -1.69
IXR1P33417 RIM20YOR275C 1986 nt4.46□□□□□ -1.7
IXR1P33417 ORC2YBR060C 1863 nt4.46□□□□□ -1.7
IXR1P33417 YDR193WYDR193W 399 nt4.46□□□□□ -1.7
IXR1P33417 YDR230WYDR230W 348 nt4.46□□□□□ -1.7
IXR1P33417 OLI1Q0130 231 nt4.46□□□□□ -1.7
IXR1P33417 PAU13YHL046C 363 nt4.46□□□□□ -1.7
IXR1P33417 RFC3YNL290W 1023 nt4.46□□□□□ -1.7
IXR1P33417 GIP4YAL031C 2283 nt4.46□□□□□ -1.7
IXR1P33417 YPL025CYPL025C 558 nt4.45□□□□□ -1.7
IXR1P33417 ATP15YPL271W 189 nt4.45□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 129.3 ms