Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 YMR046W-AYMR046W-A 129 nt3.44□□□□□ -1.86
YLR040CQ07988 ROD1YOR018W 2514 nt3.43□□□□□ -1.86
YLR040CQ07988 YHR139C-AYHR139C-A 312 nt3.43□□□□□ -1.86
YLR040CQ07988 YHR214W-AYHR214W-A 486 nt3.43□□□□□ -1.86
YLR040CQ07988 tW(UCA)QtW(UCA)Q 74 nt3.43□□□□□ -1.86
YLR040CQ07988 YAR068WYAR068W 486 nt3.43□□□□□ -1.86
YLR040CQ07988 YLR302CYLR302C 363 nt3.43□□□□□ -1.86
YLR040CQ07988 OST6YML019W 999 nt3.43□□□□□ -1.86
YLR040CQ07988 PWP2YCR057C 2772 nt3.43□□□□□ -1.86
YLR040CQ07988 YBR259WYBR259W 2067 nt3.42□□□□□ -1.86
YLR040CQ07988 SLM2YNL047C 1971 nt3.42□□□□□ -1.86
YLR040CQ07988 MUB1YMR100W 1863 nt3.42□□□□□ -1.86
YLR040CQ07988 YJL202CYJL202C 348 nt3.42□□□□□ -1.86
YLR040CQ07988 YKL162C-AYKL162C-A 153 nt3.42□□□□□ -1.86
YLR040CQ07988 FCF2YLR051C 654 nt3.42□□□□□ -1.86
YLR040CQ07988 URA10YMR271C 684 nt3.42□□□□□ -1.86
YLR040CQ07988 HSP10YOR020C 321 nt3.42□□□□□ -1.86
YLR040CQ07988 CAF130YGR134W 3369 nt3.41□□□□□ -1.86
YLR040CQ07988 HTA1YDR225W 399 nt3.41□□□□□ -1.86
YLR040CQ07988 YDR406W-AYDR406W-A 246 nt3.41□□□□□ -1.86
YLR040CQ07988 RRT13YER066W 558 nt3.41□□□□□ -1.86
YLR040CQ07988 CDC26YFR036W 375 nt3.41□□□□□ -1.86
YLR040CQ07988 YGR069WYGR069W 336 nt3.41□□□□□ -1.86
YLR040CQ07988 MSL1YIR009W 336 nt3.41□□□□□ -1.86
YLR040CQ07988 MAL33YBR297W 1407 nt3.41□□□□□ -1.86
YLR040CQ07988 GSC2YGR032W 5688 nt3.41□□□□□ -1.86
YLR040CQ07988 PRM15YMR278W 1869 nt3.41□□□□□ -1.86
YLR040CQ07988 YPS6YIR039C 1614 nt3.41□□□□□ -1.86
YLR040CQ07988 MSH4YFL003C 2637 nt3.4□□□□□ -1.86
YLR040CQ07988 OSH3YHR073W 2991 nt3.4□□□□□ -1.86
YLR040CQ07988 YDR183C-AYDR183C-A 258 nt3.4□□□□□ -1.87
YLR040CQ07988 CYC7YEL039C 342 nt3.4□□□□□ -1.87
YLR040CQ07988 SSN8YNL025C 972 nt3.4□□□□□ -1.87
YLR040CQ07988 YNL179CYNL179C 438 nt3.4□□□□□ -1.87
YLR040CQ07988 HCH1YNL281W 462 nt3.4□□□□□ -1.87
YLR040CQ07988 YOL114CYOL114C 609 nt3.4□□□□□ -1.87
YLR040CQ07988 YPL039WYPL039W 951 nt3.4□□□□□ -1.87
YLR040CQ07988 YPR099CYPR099C 357 nt3.4□□□□□ -1.87
YLR040CQ07988 NTC20YBR188C 423 nt3.4□□□□□ -1.87
YLR040CQ07988 ABP140YOR239W 1887 nt3.39□□□□□ -1.87
YLR040CQ07988 YCR081C-AYCR081C-A 237 nt3.39□□□□□ -1.87
YLR040CQ07988 YER076W-AYER076W-A 348 nt3.39□□□□□ -1.87
YLR040CQ07988 SUP56tL(CAA)A 82 nt3.39□□□□□ -1.87
YLR040CQ07988 SUP53tL(CAA)C 82 nt3.39□□□□□ -1.87
YLR040CQ07988 tL(CAA)DtL(CAA)D 82 nt3.39□□□□□ -1.87
YLR040CQ07988 tL(CAA)G1tL(CAA)G1 82 nt3.39□□□□□ -1.87
YLR040CQ07988 SUP54tL(CAA)G2 82 nt3.39□□□□□ -1.87
YLR040CQ07988 tL(CAA)G3tL(CAA)G3 82 nt3.39□□□□□ -1.87
YLR040CQ07988 tL(CAA)KtL(CAA)K 82 nt3.39□□□□□ -1.87
YLR040CQ07988 tL(CAA)LtL(CAA)L 82 nt3.39□□□□□ -1.87
YLR040CQ07988 tL(CAA)MtL(CAA)M 82 nt3.39□□□□□ -1.87
YLR040CQ07988 tL(CAA)NtL(CAA)N 82 nt3.39□□□□□ -1.87
YLR040CQ07988 RPS0AYGR214W 759 nt3.39□□□□□ -1.87
YLR040CQ07988 YIL012WYIL012W 342 nt3.39□□□□□ -1.87
YLR040CQ07988 YAL004WYAL004W 648 nt3.39□□□□□ -1.87
YLR040CQ07988 INN1YNL152W 1230 nt3.39□□□□□ -1.87
YLR040CQ07988 DGK1YOR311C 873 nt3.39□□□□□ -1.87
YLR040CQ07988 YPR077CYPR077C 372 nt3.39□□□□□ -1.87
YLR040CQ07988 FRE4YNR060W 2160 nt3.39□□□□□ -1.87
YLR040CQ07988 YLR001CYLR001C 2589 nt3.38□□□□□ -1.87
YLR040CQ07988 SRP68YPL243W 1800 nt3.38□□□□□ -1.87
YLR040CQ07988 ATP17YDR377W 306 nt3.38□□□□□ -1.87
YLR040CQ07988 IES6YEL044W 501 nt3.38□□□□□ -1.87
YLR040CQ07988 PET191YJR034W 327 nt3.38□□□□□ -1.87
YLR040CQ07988 YOL085W-AYOL085W-A 213 nt3.38□□□□□ -1.87
YLR040CQ07988 YOL160WYOL160W 342 nt3.38□□□□□ -1.87
YLR040CQ07988 NOT5YPR072W 1683 nt3.38□□□□□ -1.87
YLR040CQ07988 LCB4YOR171C 1875 nt3.38□□□□□ -1.87
YLR040CQ07988 YGL140CYGL140C 3660 nt3.38□□□□□ -1.87
YLR040CQ07988 DAN4YJR151C 3486 nt3.38□□□□□ -1.87
YLR040CQ07988 GLC3YEL011W 2115 nt3.37□□□□□ -1.87
YLR040CQ07988 snR80snR80 171 nt3.37□□□□□ -1.87
YLR040CQ07988 CAJ1YER048C 1176 nt3.37□□□□□ -1.87
YLR040CQ07988 SGN1YIR001C 753 nt3.37□□□□□ -1.87
YLR040CQ07988 YJR112W-AYJR112W-A 330 nt3.37□□□□□ -1.87
YLR040CQ07988 RPL15AYLR029C 615 nt3.37□□□□□ -1.87
YLR040CQ07988 PGA1YNL158W 597 nt3.37□□□□□ -1.87
YLR040CQ07988 YPL080CYPL080C 327 nt3.37□□□□□ -1.87
YLR040CQ07988 LTP1YPR073C 486 nt3.37□□□□□ -1.87
YLR040CQ07988 YJR030CYJR030C 2238 nt3.37□□□□□ -1.87
YLR040CQ07988 KRI1YNL308C 1776 nt3.37□□□□□ -1.87
YLR040CQ07988 RAD4YER162C 2265 nt3.37□□□□□ -1.87
YLR040CQ07988 KAP95YLR347C 2586 nt3.37□□□□□ -1.87
YLR040CQ07988 CDC45YLR103C 1953 nt3.36□□□□□ -1.87
YLR040CQ07988 TRS120YDR407C 3870 nt3.36□□□□□ -1.87
YLR040CQ07988 ATG21YPL100W 1491 nt3.36□□□□□ -1.87
YLR040CQ07988 ETP1YHL010C 1758 nt3.36□□□□□ -1.87
YLR040CQ07988 LCB5YLR260W 2064 nt3.36□□□□□ -1.87
YLR040CQ07988 YER079C-AYER079C-A 339 nt3.36□□□□□ -1.87
YLR040CQ07988 YFL063WYFL063W 456 nt3.36□□□□□ -1.87
YLR040CQ07988 YGL188C-AYGL188C-A 141 nt3.36□□□□□ -1.87
YLR040CQ07988 YIR040CYIR040C 333 nt3.36□□□□□ -1.87
YLR040CQ07988 RPS7BYNL096C 573 nt3.36□□□□□ -1.87
YLR040CQ07988 ISM1YPL040C 3009 nt3.36□□□□□ -1.87
YLR040CQ07988 TMA108YIL137C 2841 nt3.36□□□□□ -1.87
YLR040CQ07988 PBS2YJL128C 2007 nt3.36□□□□□ -1.87
YLR040CQ07988 YKL222CYKL222C 2118 nt3.35□□□□□ -1.87
YLR040CQ07988 PEX5YDR244W 1839 nt3.35□□□□□ -1.87
YLR040CQ07988 SPC72YAL047C 1869 nt3.35□□□□□ -1.87
YLR040CQ07988 YPR022CYPR022C 3402 nt3.35□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms