Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 EPL1YFL024C 2499 nt3.48□□□□□ -1.85
SSL2Q00578 HFM1YGL251C 3564 nt3.48□□□□□ -1.85
SSL2Q00578 RTR2YDR066C 591 nt3.48□□□□□ -1.85
SSL2Q00578 STE14YDR410C 720 nt3.48□□□□□ -1.85
SSL2Q00578 YMR122W-AYMR122W-A 255 nt3.48□□□□□ -1.85
SSL2Q00578 IMP4YNL075W 873 nt3.48□□□□□ -1.85
SSL2Q00578 RPS7AYOR096W 573 nt3.48□□□□□ -1.85
SSL2Q00578 YOR282WYOR282W 321 nt3.48□□□□□ -1.85
SSL2Q00578 RPL20BYOR312C 519 nt3.48□□□□□ -1.85
SSL2Q00578 ARR2YPR200C 393 nt3.48□□□□□ -1.85
SSL2Q00578 SET1YHR119W 3243 nt3.48□□□□□ -1.85
SSL2Q00578 SSE2YBR169C 2082 nt3.48□□□□□ -1.85
SSL2Q00578 SQS1YNL224C 2304 nt3.48□□□□□ -1.85
SSL2Q00578 GPI17YDR434W 1605 nt3.48□□□□□ -1.85
SSL2Q00578 HBT1YDL223C 3141 nt3.47□□□□□ -1.85
SSL2Q00578 ARO1YDR127W 4767 nt3.47□□□□□ -1.85
SSL2Q00578 YFR054CYFR054C 579 nt3.47□□□□□ -1.85
SSL2Q00578 RPL1BYGL135W 654 nt3.47□□□□□ -1.85
SSL2Q00578 COX8YLR395C 237 nt3.47□□□□□ -1.85
SSL2Q00578 YMR031W-AYMR031W-A 327 nt3.47□□□□□ -1.85
SSL2Q00578 RPL1AYPL220W 654 nt3.47□□□□□ -1.85
SSL2Q00578 PIS1YPR113W 663 nt3.47□□□□□ -1.85
SSL2Q00578 DNM1YLL001W 2274 nt3.47□□□□□ -1.85
SSL2Q00578 PFK26YIL107C 2484 nt3.47□□□□□ -1.85
SSL2Q00578 VBA4YDR119W 2307 nt3.47□□□□□ -1.85
SSL2Q00578 RIM13YMR154C 2184 nt3.46□□□□□ -1.85
SSL2Q00578 BFR1YOR198C 1413 nt3.46□□□□□ -1.86
SSL2Q00578 CIN1YOR349W 3045 nt3.46□□□□□ -1.86
SSL2Q00578 FMN1YDR236C 657 nt3.46□□□□□ -1.86
SSL2Q00578 SDH7YDR511W 402 nt3.46□□□□□ -1.86
SSL2Q00578 YHR052W-AYHR052W-A 195 nt3.46□□□□□ -1.86
SSL2Q00578 YHR054W-AYHR054W-A 195 nt3.46□□□□□ -1.86
SSL2Q00578 CWC24YLR323C 780 nt3.46□□□□□ -1.86
SSL2Q00578 UBC7YMR022W 498 nt3.46□□□□□ -1.86
SSL2Q00578 RRD2YPL152W 1077 nt3.46□□□□□ -1.86
SSL2Q00578 FUN30YAL019W 3396 nt3.46□□□□□ -1.86
SSL2Q00578 VAC14YLR386W 2643 nt3.45□□□□□ -1.86
SSL2Q00578 DFG10YIL049W 762 nt3.45□□□□□ -1.86
SSL2Q00578 YIL054WYIL054W 318 nt3.45□□□□□ -1.86
SSL2Q00578 DLS1YJL065C 504 nt3.45□□□□□ -1.86
SSL2Q00578 YOR277CYOR277C 309 nt3.45□□□□□ -1.86
SSL2Q00578 UBP14YBR058C 2346 nt3.45□□□□□ -1.86
SSL2Q00578 YDL180WYDL180W 1644 nt3.44□□□□□ -1.86
SSL2Q00578 YRR1YOR162C 2433 nt3.44□□□□□ -1.86
SSL2Q00578 RCY1YJL204C 2523 nt3.44□□□□□ -1.86
SSL2Q00578 TFC1YBR123C 1950 nt3.44□□□□□ -1.86
SSL2Q00578 NHP2YDL208W 471 nt3.44□□□□□ -1.86
SSL2Q00578 YGL042CYGL042C 306 nt3.44□□□□□ -1.86
SSL2Q00578 RPS23AYGR118W 438 nt3.44□□□□□ -1.86
SSL2Q00578 YHL037CYHL037C 402 nt3.44□□□□□ -1.86
SSL2Q00578 RMP1YLR145W 606 nt3.44□□□□□ -1.86
SSL2Q00578 TVP18YMR071C 504 nt3.44□□□□□ -1.86
SSL2Q00578 YNL043CYNL043C 321 nt3.44□□□□□ -1.86
SSL2Q00578 YOR121CYOR121C 306 nt3.44□□□□□ -1.86
SSL2Q00578 RPS23BYPR132W 438 nt3.44□□□□□ -1.86
SSL2Q00578 POL4YCR014C 1749 nt3.44□□□□□ -1.86
SSL2Q00578 YBR259WYBR259W 2067 nt3.43□□□□□ -1.86
SSL2Q00578 YDL152WYDL152W 366 nt3.43□□□□□ -1.86
SSL2Q00578 SMB1YER029C 591 nt3.43□□□□□ -1.86
SSL2Q00578 RPS24BYIL069C 408 nt3.43□□□□□ -1.86
SSL2Q00578 YOR192C-CYOR192C-C 237 nt3.43□□□□□ -1.86
SSL2Q00578 NSL1YPL233W 651 nt3.43□□□□□ -1.86
SSL2Q00578 STP2YHR006W 1626 nt3.43□□□□□ -1.86
SSL2Q00578 XRN1YGL173C 4587 nt3.43□□□□□ -1.86
SSL2Q00578 ATG13YPR185W 2217 nt3.43□□□□□ -1.86
SSL2Q00578 MDV1YJL112W 2145 nt3.43□□□□□ -1.86
SSL2Q00578 PCK1YKR097W 1650 nt3.43□□□□□ -1.86
SSL2Q00578 21S_rRNA21S_rRNA 3296 nt3.42□□□□□ -1.86
SSL2Q00578 HEH2YDR458C 1992 nt3.42□□□□□ -1.86
SSL2Q00578 EAP1YKL204W 1899 nt3.42□□□□□ -1.86
SSL2Q00578 YDR194W-AYDR194W-A 153 nt3.42□□□□□ -1.86
SSL2Q00578 SMX2YFL017W-A 234 nt3.42□□□□□ -1.86
SSL2Q00578 YGL152CYGL152C 678 nt3.42□□□□□ -1.86
SSL2Q00578 YPS5YGL259W 498 nt3.42□□□□□ -1.86
SSL2Q00578 YGR053CYGR053C 852 nt3.42□□□□□ -1.86
SSL2Q00578 YKL156C-AYKL156C-A 117 nt3.42□□□□□ -1.86
SSL2Q00578 UNG1YML021C 1080 nt3.42□□□□□ -1.86
SSL2Q00578 OST1YJL002C 1431 nt3.42□□□□□ -1.86
SSL2Q00578 AYT1YLL063C 1425 nt3.42□□□□□ -1.86
SSL2Q00578 GCD10YNL062C 1437 nt3.42□□□□□ -1.86
SSL2Q00578 CHS3YBR023C 3498 nt3.41□□□□□ -1.86
SSL2Q00578 HOP2YGL033W 657 nt3.41□□□□□ -1.86
SSL2Q00578 OTU2YHL013C 924 nt3.41□□□□□ -1.86
SSL2Q00578 RPL16BYNL069C 597 nt3.41□□□□□ -1.86
SSL2Q00578 ZEO1YOL109W 342 nt3.41□□□□□ -1.86
SSL2Q00578 ERP4YOR016C 624 nt3.41□□□□□ -1.86
SSL2Q00578 GYL1YMR192W 2163 nt3.41□□□□□ -1.86
SSL2Q00578 GNT1YOR320C 1476 nt3.41□□□□□ -1.86
SSL2Q00578 YCG1YDR325W 3108 nt3.4□□□□□ -1.86
SSL2Q00578 YDR133CYDR133C 336 nt3.4□□□□□ -1.87
SSL2Q00578 YDR442WYDR442W 393 nt3.4□□□□□ -1.87
SSL2Q00578 YER097WYER097W 330 nt3.4□□□□□ -1.87
SSL2Q00578 YGR242WYGR242W 309 nt3.4□□□□□ -1.87
SSL2Q00578 PAU13YHL046C 363 nt3.4□□□□□ -1.87
SSL2Q00578 LTP1YPR073C 486 nt3.4□□□□□ -1.87
SSL2Q00578 HOP1YIL072W 1818 nt3.4□□□□□ -1.87
SSL2Q00578 MNT3YIL014W 1893 nt3.39□□□□□ -1.87
SSL2Q00578 PHO81YGR233C 3537 nt3.39□□□□□ -1.87
SSL2Q00578 FAA2YER015W 2235 nt3.39□□□□□ -1.87
SSL2Q00578 TDA1YMR291W 1761 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 38 ms