Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1A1P48729 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.33■□□□□ 0.52
CSNK1A1P48729 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.33■□□□□ 0.52
CSNK1A1P48729 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1A1P48729 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1A1P48729 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1A1P48729 AC011484.1-201ENST00000377652 1995 ntBASIC18.33■□□□□ 0.52
CSNK1A1P48729 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1A1P48729 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSNK1A1P48729 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1A1P48729 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1A1P48729 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1A1P48729 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1A1P48729 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1A1P48729 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1A1P48729 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1A1P48729 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSNK1A1P48729 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CSNK1A1P48729 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CSNK1A1P48729 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CSNK1A1P48729 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1A1P48729 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1A1P48729 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1A1P48729 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.3■□□□□ 0.52
CSNK1A1P48729 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CSNK1A1P48729 AC010536.3-201ENST00000620306 533 ntBASIC18.3■□□□□ 0.52
CSNK1A1P48729 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1A1P48729 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1A1P48729 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CSNK1A1P48729 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.3■□□□□ 0.52
CSNK1A1P48729 AC116050.2-201ENST00000612102 1779 ntBASIC18.3■□□□□ 0.52
CSNK1A1P48729 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CSNK1A1P48729 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1A1P48729 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CSNK1A1P48729 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1A1P48729 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.29■□□□□ 0.52
CSNK1A1P48729 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.29■□□□□ 0.52
CSNK1A1P48729 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1A1P48729 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1A1P48729 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1A1P48729 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1A1P48729 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1A1P48729 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1A1P48729 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1A1P48729 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 AC091799.1-201ENST00000422823 811 ntBASIC18.28■□□□□ 0.52
CSNK1A1P48729 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 TERF1P5-201ENST00000477545 1207 ntBASIC18.28■□□□□ 0.52
CSNK1A1P48729 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1A1P48729 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.28■□□□□ 0.52
CSNK1A1P48729 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1A1P48729 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms