Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 RLF2YPR018W 1821 nt2.18□□□□□ -2.06
TDA11P38854 UTP5YDR398W 1932 nt2.18□□□□□ -2.06
TDA11P38854 SWA2YDR320C 2007 nt2.18□□□□□ -2.06
TDA11P38854 TRZ1YKR079C 2517 nt2.17□□□□□ -2.06
TDA11P38854 snR76snR76 109 nt2.17□□□□□ -2.06
TDA11P38854 MIC19YFR011C 513 nt2.17□□□□□ -2.06
TDA11P38854 PAU14YIL176C 363 nt2.17□□□□□ -2.06
TDA11P38854 PAU1YJL223C 363 nt2.17□□□□□ -2.06
TDA11P38854 RNP1YLL046C 750 nt2.17□□□□□ -2.06
TDA11P38854 END3YNL084C 1050 nt2.17□□□□□ -2.06
TDA11P38854 ESF2YNR054C 951 nt2.17□□□□□ -2.06
TDA11P38854 YBR051WYBR051W 351 nt2.17□□□□□ -2.06
TDA11P38854 RXT2YBR095C 1293 nt2.17□□□□□ -2.06
TDA11P38854 MBA1YBR185C 837 nt2.17□□□□□ -2.06
TDA11P38854 CBF2YGR140W 2871 nt2.17□□□□□ -2.06
TDA11P38854 SPB1YCL054W 2526 nt2.17□□□□□ -2.06
TDA11P38854 SCY1YGL083W 2415 nt2.17□□□□□ -2.06
TDA11P38854 URK1YNR012W 1506 nt2.17□□□□□ -2.06
TDA11P38854 COG3YER157W 2406 nt2.16□□□□□ -2.06
TDA11P38854 BTN2YGR142W 1233 nt2.16□□□□□ -2.06
TDA11P38854 TPK3YKL166C 1197 nt2.16□□□□□ -2.06
TDA11P38854 RMP1YLR145W 606 nt2.16□□□□□ -2.06
TDA11P38854 NEJ1YLR265C 1029 nt2.16□□□□□ -2.06
TDA11P38854 YNR034W-AYNR034W-A 297 nt2.16□□□□□ -2.06
TDA11P38854 YPR097WYPR097W 3222 nt2.16□□□□□ -2.06
TDA11P38854 LST4YKL176C 2487 nt2.16□□□□□ -2.06
TDA11P38854 ELG1YOR144C 2376 nt2.16□□□□□ -2.06
TDA11P38854 BFR1YOR198C 1413 nt2.16□□□□□ -2.06
TDA11P38854 TAE2YPL009C 3117 nt2.15□□□□□ -2.06
TDA11P38854 HSE1YHL002W 1359 nt2.15□□□□□ -2.07
TDA11P38854 SCP160YJL080C 3669 nt2.15□□□□□ -2.07
TDA11P38854 YDL157CYDL157C 357 nt2.15□□□□□ -2.07
TDA11P38854 SLU7YDR088C 1149 nt2.15□□□□□ -2.07
TDA11P38854 RMD6YEL072W 696 nt2.15□□□□□ -2.07
TDA11P38854 FSH1YHR049W 732 nt2.15□□□□□ -2.07
TDA11P38854 YJL052C-AYJL052C-A 120 nt2.15□□□□□ -2.07
TDA11P38854 SMD3YLR147C 306 nt2.15□□□□□ -2.07
TDA11P38854 SPC2YML055W 537 nt2.15□□□□□ -2.07
TDA11P38854 RPL25YOL127W 429 nt2.15□□□□□ -2.07
TDA11P38854 MGE1YOR232W 687 nt2.15□□□□□ -2.07
TDA11P38854 DAL5YJR152W 1632 nt2.15□□□□□ -2.07
TDA11P38854 RGL1YPL066W 1440 nt2.15□□□□□ -2.07
TDA11P38854 YNL018CYNL018C 1839 nt2.14□□□□□ -2.07
TDA11P38854 REV3YPL167C 4515 nt2.14□□□□□ -2.07
TDA11P38854 YRB1YDR002W 606 nt2.14□□□□□ -2.07
TDA11P38854 YER107W-AYER107W-A 321 nt2.14□□□□□ -2.07
TDA11P38854 GLC7YER133W 939 nt2.14□□□□□ -2.07
TDA11P38854 RSM27YGR215W 333 nt2.14□□□□□ -2.07
TDA11P38854 PET191YJR034W 327 nt2.14□□□□□ -2.07
TDA11P38854 LCL2YLR104W 396 nt2.14□□□□□ -2.07
TDA11P38854 CRS5YOR031W 210 nt2.14□□□□□ -2.07
TDA11P38854 CLN3YAL040C 1743 nt2.14□□□□□ -2.07
TDA11P38854 TMN3YER113C 2121 nt2.13□□□□□ -2.07
TDA11P38854 AAD16YFL057C 459 nt2.13□□□□□ -2.07
TDA11P38854 YHR052W-AYHR052W-A 195 nt2.13□□□□□ -2.07
TDA11P38854 YHR054W-AYHR054W-A 195 nt2.13□□□□□ -2.07
TDA11P38854 SUI2YJR007W 915 nt2.13□□□□□ -2.07
TDA11P38854 PAU8YAL068C 363 nt2.13□□□□□ -2.07
TDA11P38854 YLR198CYLR198C 360 nt2.13□□□□□ -2.07
TDA11P38854 YMR320WYMR320W 306 nt2.13□□□□□ -2.07
TDA11P38854 PAU20YOL161C 363 nt2.13□□□□□ -2.07
TDA11P38854 HSC82YMR186W 2118 nt2.12□□□□□ -2.07
TDA11P38854 CTF13YMR094W 1437 nt2.12□□□□□ -2.07
TDA11P38854 YEA4YEL004W 1029 nt2.12□□□□□ -2.07
TDA11P38854 YFR057WYFR057W 456 nt2.12□□□□□ -2.07
TDA11P38854 COG2YGR120C 789 nt2.12□□□□□ -2.07
TDA11P38854 CKA1YIL035C 1119 nt2.12□□□□□ -2.07
TDA11P38854 YJL156W-AYJL156W-A 222 nt2.12□□□□□ -2.07
TDA11P38854 UTP30YKR060W 825 nt2.12□□□□□ -2.07
TDA11P38854 YAL064WYAL064W 285 nt2.12□□□□□ -2.07
TDA11P38854 YLR154W-AYLR154W-A 186 nt2.12□□□□□ -2.07
TDA11P38854 YMR173W-AYMR173W-A 1185 nt2.12□□□□□ -2.07
TDA11P38854 YAP7YOL028C 738 nt2.12□□□□□ -2.07
TDA11P38854 ARL1YBR164C 552 nt2.12□□□□□ -2.07
TDA11P38854 UFD4YKL010C 4452 nt2.12□□□□□ -2.07
TDA11P38854 APL5YPL195W 2799 nt2.12□□□□□ -2.07
TDA11P38854 PCK1YKR097W 1650 nt2.12□□□□□ -2.07
TDA11P38854 ALY1YKR021W 2748 nt2.11□□□□□ -2.07
TDA11P38854 HOS4YIL112W 3252 nt2.11□□□□□ -2.07
TDA11P38854 GPI17YDR434W 1605 nt2.11□□□□□ -2.07
TDA11P38854 YCR108CYCR108C 192 nt2.11□□□□□ -2.07
TDA11P38854 VTC1YER072W 390 nt2.11□□□□□ -2.07
TDA11P38854 YER119C-AYER119C-A 372 nt2.11□□□□□ -2.07
TDA11P38854 CWC23YGL128C 852 nt2.11□□□□□ -2.07
TDA11P38854 ACB1YGR037C 264 nt2.11□□□□□ -2.07
TDA11P38854 TWF1YGR080W 999 nt2.11□□□□□ -2.07
TDA11P38854 RRT16YNL105W 429 nt2.11□□□□□ -2.07
TDA11P38854 YCL023CYCL023C 348 nt2.11□□□□□ -2.07
TDA11P38854 GUP1YGL084C 1683 nt2.11□□□□□ -2.07
TDA11P38854 YFR016CYFR016C 3702 nt2.11□□□□□ -2.07
TDA11P38854 YDR338CYDR338C 2088 nt2.1□□□□□ -2.07
TDA11P38854 ROY1YMR258C 1662 nt2.1□□□□□ -2.07
TDA11P38854 ATP16YDL004W 483 nt2.1□□□□□ -2.07
TDA11P38854 YDL118WYDL118W 381 nt2.1□□□□□ -2.07
TDA11P38854 YFH1YDL120W 525 nt2.1□□□□□ -2.07
TDA11P38854 RPS24AYER074W 408 nt2.1□□□□□ -2.07
TDA11P38854 EST3YIL009C-A 546 nt2.1□□□□□ -2.07
TDA11P38854 COX8YLR395C 237 nt2.1□□□□□ -2.07
TDA11P38854 YOL085W-AYOL085W-A 213 nt2.1□□□□□ -2.07
TDA11P38854 PEP12YOR036W 867 nt2.1□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 74.3 ms