Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 WIP1YDR374W-A 270 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 SMT3YDR510W 306 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 YGR283CYGR283C 1026 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 RPL34BYIL052C 366 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 RDN58-1RDN58-1 158 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 RDN58-2RDN58-2 158 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 YNL043CYNL043C 321 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 YSY6YBR162W-A 198 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 ECM18YDR125C 1362 nt1.31□□□□□ -2.2
TY1B-PR3P0C2J1 MAD3YJL013C 1548 nt1.3□□□□□ -2.2
TY1B-PR3P0C2J1 PML1YLR016C 615 nt1.3□□□□□ -2.2
TY1B-PR3P0C2J1 NST1YNL091W 3723 nt1.3□□□□□ -2.2
TY1B-PR3P0C2J1 PMD1YER132C 5262 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 YTH1YPR107C 627 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 SLY41YOR307C 1362 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 RTT101YJL047C 2529 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 MPO1YGL010W 525 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 YLR124WYLR124W 345 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 URA5YML106W 681 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 THI80YOR143C 960 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 NPL6YMR091C 1308 nt1.29□□□□□ -2.2
TY1B-PR3P0C2J1 SPB4YFL002C 1821 nt1.28□□□□□ -2.2
TY1B-PR3P0C2J1 YDR170W-AYDR170W-A 1323 nt1.28□□□□□ -2.2
TY1B-PR3P0C2J1 YML009C-AYML009C-A 327 nt1.28□□□□□ -2.2
TY1B-PR3P0C2J1 SNO1YMR095C 675 nt1.28□□□□□ -2.2
TY1B-PR3P0C2J1 PEP12YOR036W 867 nt1.28□□□□□ -2.2
TY1B-PR3P0C2J1 CDC37YDR168W 1521 nt1.27□□□□□ -2.21
TY1B-PR3P0C2J1 YCL076WYCL076W 744 nt1.27□□□□□ -2.21
TY1B-PR3P0C2J1 NCE101YJL205C 162 nt1.27□□□□□ -2.21
TY1B-PR3P0C2J1 YBR292CYBR292C 372 nt1.27□□□□□ -2.21
TY1B-PR3P0C2J1 YER087C-AYER087C-A 552 nt1.26□□□□□ -2.21
TY1B-PR3P0C2J1 PAU8YAL068C 363 nt1.26□□□□□ -2.21
TY1B-PR3P0C2J1 YNL184CYNL184C 327 nt1.26□□□□□ -2.21
TY1B-PR3P0C2J1 PAU20YOL161C 363 nt1.26□□□□□ -2.21
TY1B-PR3P0C2J1 PNT1YOR266W 1272 nt1.26□□□□□ -2.21
TY1B-PR3P0C2J1 BUL2YML111W 2763 nt1.26□□□□□ -2.21
TY1B-PR3P0C2J1 AIM11YER093C-A 414 nt1.26□□□□□ -2.21
TY1B-PR3P0C2J1 HNT3YOR258W 654 nt1.26□□□□□ -2.21
TY1B-PR3P0C2J1 YKL162CYKL162C 1209 nt1.25□□□□□ -2.21
TY1B-PR3P0C2J1 LSM2YBL026W 288 nt1.25□□□□□ -2.21
TY1B-PR3P0C2J1 SFG1YOR315W 1041 nt1.25□□□□□ -2.21
TY1B-PR3P0C2J1 BRO1YPL084W 2535 nt1.25□□□□□ -2.21
TY1B-PR3P0C2J1 FIG2YCR089W 4830 nt1.25□□□□□ -2.21
TY1B-PR3P0C2J1 GYL1YMR192W 2163 nt1.25□□□□□ -2.21
TY1B-PR3P0C2J1 YDR521WYDR521W 336 nt1.24□□□□□ -2.21
TY1B-PR3P0C2J1 YGL165CYGL165C 579 nt1.24□□□□□ -2.21
TY1B-PR3P0C2J1 UBC7YMR022W 498 nt1.24□□□□□ -2.21
TY1B-PR3P0C2J1 AAH1YNL141W 1044 nt1.24□□□□□ -2.21
TY1B-PR3P0C2J1 RPL11BYGR085C 525 nt1.24□□□□□ -2.21
TY1B-PR3P0C2J1 RPL11AYPR102C 525 nt1.24□□□□□ -2.21
TY1B-PR3P0C2J1 SKO1YNL167C 1944 nt1.23□□□□□ -2.21
TY1B-PR3P0C2J1 DPP1YDR284C 870 nt1.23□□□□□ -2.21
TY1B-PR3P0C2J1 YML084WYML084W 309 nt1.23□□□□□ -2.21
TY1B-PR3P0C2J1 SEC21YNL287W 2808 nt1.23□□□□□ -2.21
TY1B-PR3P0C2J1 YDR340WYDR340W 303 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)BtT(AGU)B 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)CtT(AGU)C 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)DtT(AGU)D 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)HtT(AGU)H 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)I1tT(AGU)I1 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)I2tT(AGU)I2 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)JtT(AGU)J 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)N1tT(AGU)N1 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)N2tT(AGU)N2 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)O1tT(AGU)O1 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 tT(AGU)O2tT(AGU)O2 73 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 YOL035CYOL035C 303 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 YOR218CYOR218C 420 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 RUD3YOR216C 1455 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 RSM22YKL155C 1887 nt1.22□□□□□ -2.21
TY1B-PR3P0C2J1 VAM6YDL077C 3150 nt1.21□□□□□ -2.22
TY1B-PR3P0C2J1 BAT1YHR208W 1182 nt1.21□□□□□ -2.22
TY1B-PR3P0C2J1 CMC4YMR194C-B 222 nt1.21□□□□□ -2.22
TY1B-PR3P0C2J1 YPL073CYPL073C 486 nt1.21□□□□□ -2.22
TY1B-PR3P0C2J1 THO2YNL139C 4794 nt1.2□□□□□ -2.22
TY1B-PR3P0C2J1 DBF20YPR111W 1695 nt1.2□□□□□ -2.22
TY1B-PR3P0C2J1 CDC10YCR002C 969 nt1.2□□□□□ -2.22
TY1B-PR3P0C2J1 YGR050CYGR050C 357 nt1.2□□□□□ -2.22
TY1B-PR3P0C2J1 YIL059CYIL059C 366 nt1.2□□□□□ -2.22
TY1B-PR3P0C2J1 YMR230W-AYMR230W-A 189 nt1.2□□□□□ -2.22
TY1B-PR3P0C2J1 BRE5YNR051C 1548 nt1.2□□□□□ -2.22
TY1B-PR3P0C2J1 PAU3YCR104W 375 nt1.19□□□□□ -2.22
TY1B-PR3P0C2J1 EBP2YKL172W 1284 nt1.19□□□□□ -2.22
TY1B-PR3P0C2J1 YAL034C-BYAL034C-B 354 nt1.19□□□□□ -2.22
TY1B-PR3P0C2J1 SPO24YPR036W-A 204 nt1.19□□□□□ -2.22
TY1B-PR3P0C2J1 IRA2YOL081W 9240 nt1.18□□□□□ -2.22
TY1B-PR3P0C2J1 PEP8YJL053W 1140 nt1.18□□□□□ -2.22
TY1B-PR3P0C2J1 TFA2YKR062W 987 nt1.18□□□□□ -2.22
TY1B-PR3P0C2J1 YNL114CYNL114C 372 nt1.18□□□□□ -2.22
TY1B-PR3P0C2J1 ARI1YGL157W 1044 nt1.17□□□□□ -2.22
TY1B-PR3P0C2J1 PLM2YDR501W 1566 nt1.17□□□□□ -2.22
TY1B-PR3P0C2J1 OST2YOR103C 393 nt1.16□□□□□ -2.22
TY1B-PR3P0C2J1 GAL7YBR018C 1101 nt1.16□□□□□ -2.22
TY1B-PR3P0C2J1 HMS1YOR032C 1305 nt1.16□□□□□ -2.22
TY1B-PR3P0C2J1 PET130YJL023C 1044 nt1.16□□□□□ -2.22
TY1B-PR3P0C2J1 YOR082CYOR082C 342 nt1.16□□□□□ -2.22
TY1B-PR3P0C2J1 RED1YLR263W 2484 nt1.15□□□□□ -2.22
TY1B-PR3P0C2J1 TRS65YGR166W 1683 nt1.15□□□□□ -2.22
TY1B-PR3P0C2J1 PIN4YBL051C 2007 nt1.15□□□□□ -2.22
TY1B-PR3P0C2J1 SNF5YBR289W 2718 nt1.15□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 59.8 ms