Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 AC010536.3-201ENST00000620306 533 ntBASIC18.06■□□□□ 0.48
CDH20Q9HBT6 AC092437.1-201ENST00000624794 1048 ntBASIC18.06■□□□□ 0.48
CDH20Q9HBT6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 MFSD11-216ENST00000590393 1141 ntBASIC18.05■□□□□ 0.48
CDH20Q9HBT6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH20Q9HBT6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CDH20Q9HBT6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 TERF1P5-201ENST00000477545 1207 ntBASIC18.03■□□□□ 0.48
CDH20Q9HBT6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 AL121603.2-201ENST00000557373 2117 ntBASIC18.03■□□□□ 0.48
CDH20Q9HBT6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDH20Q9HBT6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 AC080038.1-201ENST00000611274 1154 ntBASIC18.02■□□□□ 0.48
CDH20Q9HBT6 AC243732.1-201ENST00000612648 864 ntBASIC18.02■□□□□ 0.48
CDH20Q9HBT6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.02■□□□□ 0.48
CDH20Q9HBT6 RBM17P2-201ENST00000616397 1405 ntBASIC18.02■□□□□ 0.48
CDH20Q9HBT6 AC013268.1-206ENST00000638368 961 ntBASIC18.02■□□□□ 0.48
CDH20Q9HBT6 AC112229.1-201ENST00000639295 961 ntBASIC18.02■□□□□ 0.48
CDH20Q9HBT6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.02■□□□□ 0.47
CDH20Q9HBT6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH20Q9HBT6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
CDH20Q9HBT6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.02■□□□□ 0.47
CDH20Q9HBT6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDH20Q9HBT6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 FEM1AP4-201ENST00000443167 1987 ntBASIC18.01■□□□□ 0.47
CDH20Q9HBT6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH20Q9HBT6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms