Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 AC010980.2-201ENST00000587099 1412 ntBASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.06■□□□□ 0.8
SNAP47Q5SQN1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SNAP47Q5SQN1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 AC092118.2-201ENST00000613495 667 ntBASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 GUSBP5-202ENST00000510805 1989 ntBASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 AC242852.2-201ENST00000615738 1807 ntBASIC20.04■□□□□ 0.8
SNAP47Q5SQN1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 AL162412.1-201ENST00000567129 965 ntBASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNAP47Q5SQN1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 AC091799.1-201ENST00000422823 811 ntBASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 AC097658.1-201ENST00000475555 843 ntBASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.02■□□□□ 0.8
SNAP47Q5SQN1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.02■□□□□ 0.79
SNAP47Q5SQN1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNAP47Q5SQN1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNAP47Q5SQN1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms