Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YML003W	YML003W	873 nt		3.46	□□□□□ -1.86
CAF16	P43569	YLR352W	YLR352W	2424 nt		3.46	□□□□□ -1.86
CAF16	P43569	HEF3	YNL014W	3135 nt		3.46	□□□□□ -1.86
CAF16	P43569	RRN6	YBL014C	2685 nt		3.45	□□□□□ -1.86
CAF16	P43569	TFB1	YDR311W	1929 nt		3.45	□□□□□ -1.86
CAF16	P43569	CWH43	YCR017C	2862 nt		3.45	□□□□□ -1.86
CAF16	P43569	SPR6	YER115C	576 nt		3.45	□□□□□ -1.86
CAF16	P43569	RAD6	YGL058W	519 nt		3.45	□□□□□ -1.86
CAF16	P43569	HIT1	YJR055W	495 nt		3.45	□□□□□ -1.86
CAF16	P43569	COQ5	YML110C	924 nt		3.45	□□□□□ -1.86
CAF16	P43569	RSC1	YGR056W	2787 nt		3.45	□□□□□ -1.86
CAF16	P43569	CWC22	YGR278W	1734 nt		3.44	□□□□□ -1.86
CAF16	P43569	YDR464C-A	YDR464C-A	189 nt		3.44	□□□□□ -1.86
CAF16	P43569	YER066C-A	YER066C-A	501 nt		3.44	□□□□□ -1.86
CAF16	P43569	RRT13	YER066W	558 nt		3.44	□□□□□ -1.86
CAF16	P43569	YGL165C	YGL165C	579 nt		3.44	□□□□□ -1.86
CAF16	P43569	COX23	YHR116W	456 nt		3.44	□□□□□ -1.86
CAF16	P43569	MGR2	YPL098C	342 nt		3.44	□□□□□ -1.86
CAF16	P43569	TIM12	YBR091C	330 nt		3.44	□□□□□ -1.86
CAF16	P43569	OSH3	YHR073W	2991 nt		3.44	□□□□□ -1.86
CAF16	P43569	PRP22	YER013W	3438 nt		3.44	□□□□□ -1.86
CAF16	P43569	BFR1	YOR198C	1413 nt		3.44	□□□□□ -1.86
CAF16	P43569	KIN82	YCR091W	2163 nt		3.44	□□□□□ -1.86
CAF16	P43569	RNH70	YGR276C	1662 nt		3.43	□□□□□ -1.86
CAF16	P43569	YDL228C	YDL228C	642 nt		3.43	□□□□□ -1.86
CAF16	P43569	RRF1	YHR038W	693 nt		3.43	□□□□□ -1.86
CAF16	P43569	YIL030W-A	YIL030W-A	339 nt		3.43	□□□□□ -1.86
CAF16	P43569	YAL026C-A	YAL026C-A	438 nt		3.43	□□□□□ -1.86
CAF16	P43569	YJR079W	YJR079W	330 nt		3.43	□□□□□ -1.86
CAF16	P43569	SEC22	YLR268W	645 nt		3.43	□□□□□ -1.86
CAF16	P43569	BSC3	YLR465C	309 nt		3.43	□□□□□ -1.86
CAF16	P43569	SIP18	YMR175W	240 nt		3.43	□□□□□ -1.86
CAF16	P43569	YBL071C	YBL071C	309 nt		3.43	□□□□□ -1.86
CAF16	P43569	TSC3	YBR058C-A	243 nt		3.43	□□□□□ -1.86
CAF16	P43569	YPL197C	YPL197C	414 nt		3.43	□□□□□ -1.86
CAF16	P43569	YPR197C	YPR197C	564 nt		3.43	□□□□□ -1.86
CAF16	P43569	SWD3	YBR175W	948 nt		3.43	□□□□□ -1.86
CAF16	P43569	RAD26	YJR035W	3258 nt		3.43	□□□□□ -1.86
CAF16	P43569	FLO8	YER109C	2400 nt		3.43	□□□□□ -1.86
CAF16	P43569	TRZ1	YKR079C	2517 nt		3.42	□□□□□ -1.86
CAF16	P43569	SNF12	YNR023W	1701 nt		3.42	□□□□□ -1.86
CAF16	P43569	SPT4	YGR063C	309 nt		3.42	□□□□□ -1.86
CAF16	P43569	MDV1	YJL112W	2145 nt		3.42	□□□□□ -1.86
CAF16	P43569	SPP382	YLR424W	2127 nt		3.42	□□□□□ -1.86
CAF16	P43569	ICY2	YPL250C	411 nt		3.42	□□□□□ -1.86
CAF16	P43569	SET1	YHR119W	3243 nt		3.42	□□□□□ -1.86
CAF16	P43569	ALA1	YOR335C	2877 nt		3.42	□□□□□ -1.86
CAF16	P43569	RAD5	YLR032W	3510 nt		3.41	□□□□□ -1.86
CAF16	P43569	VHR2	YER064C	1518 nt		3.41	□□□□□ -1.86
CAF16	P43569	SPC19	YDR201W	498 nt		3.41	□□□□□ -1.86
CAF16	P43569	TIF35	YDR429C	825 nt		3.41	□□□□□ -1.86
CAF16	P43569	SOD1	YJR104C	465 nt		3.41	□□□□□ -1.86
CAF16	P43569	FLD1	YLR404W	858 nt		3.41	□□□□□ -1.86
CAF16	P43569	RPS7A	YOR096W	573 nt		3.41	□□□□□ -1.86
CAF16	P43569	DGK1	YOR311C	873 nt		3.41	□□□□□ -1.86
CAF16	P43569	YPR014C	YPR014C	330 nt		3.41	□□□□□ -1.86
CAF16	P43569	RSF2	YJR127C	4143 nt		3.41	□□□□□ -1.86
CAF16	P43569	NOP4	YPL043W	2058 nt		3.4	□□□□□ -1.86
CAF16	P43569	AIP1	YMR092C	1848 nt		3.4	□□□□□ -1.86
CAF16	P43569	YGL074C	YGL074C	327 nt		3.4	□□□□□ -1.87
CAF16	P43569	VOA1	YGR106C	798 nt		3.4	□□□□□ -1.87
CAF16	P43569	RPL37A	YLR185W	267 nt		3.4	□□□□□ -1.87
CAF16	P43569	PEX17	YNL214W	600 nt		3.4	□□□□□ -1.87
CAF16	P43569	snR191	snR191	274 nt		3.4	□□□□□ -1.87
CAF16	P43569	GCR1	YPL075W	2358 nt		3.4	□□□□□ -1.87
CAF16	P43569	SAF1	YBR280C	1914 nt		3.39	□□□□□ -1.87
CAF16	P43569	DPB11	YJL090C	2295 nt		3.39	□□□□□ -1.87
CAF16	P43569	LAG1	YHL003C	1236 nt		3.39	□□□□□ -1.87
CAF16	P43569	YJR023C	YJR023C	402 nt		3.39	□□□□□ -1.87
CAF16	P43569	MRP8	YKL142W	660 nt		3.39	□□□□□ -1.87
CAF16	P43569	RPP0	YLR340W	939 nt		3.39	□□□□□ -1.87
CAF16	P43569	ISU1	YPL135W	498 nt		3.39	□□□□□ -1.87
CAF16	P43569	NUP60	YAR002W	1620 nt		3.38	□□□□□ -1.87
CAF16	P43569	YDR210W-B	YDR210W-B	5313 nt		3.38	□□□□□ -1.87
CAF16	P43569	YDR261W-B	YDR261W-B	5313 nt		3.38	□□□□□ -1.87
CAF16	P43569	YFL002W-A	YFL002W-A	5313 nt		3.38	□□□□□ -1.87
CAF16	P43569	YGR161W-B	YGR161W-B	5313 nt		3.38	□□□□□ -1.87
CAF16	P43569	YLR410W-B	YLR410W-B	5313 nt		3.38	□□□□□ -1.87
CAF16	P43569	YCL019W	YCL019W	5313 nt		3.38	□□□□□ -1.87
CAF16	P43569	YDR090C	YDR090C	933 nt		3.38	□□□□□ -1.87
CAF16	P43569	SDH7	YDR511W	402 nt		3.38	□□□□□ -1.87
CAF16	P43569	EFB1	YAL003W	621 nt		3.38	□□□□□ -1.87
CAF16	P43569	FMP46	YKR049C	402 nt		3.38	□□□□□ -1.87
CAF16	P43569	YNL277W-A	YNL277W-A	189 nt		3.38	□□□□□ -1.87
CAF16	P43569	RPB11	YOL005C	363 nt		3.38	□□□□□ -1.87
CAF16	P43569	CHA4	YLR098C	1947 nt		3.38	□□□□□ -1.87
CAF16	P43569	DPH6	YLR143W	2058 nt		3.37	□□□□□ -1.87
CAF16	P43569	IRC4	YDR540C	540 nt		3.37	□□□□□ -1.87
CAF16	P43569	RPS20	YHL015W	366 nt		3.37	□□□□□ -1.87
CAF16	P43569	YML116W-A	YML116W-A	303 nt		3.37	□□□□□ -1.87
CAF16	P43569	SSN8	YNL025C	972 nt		3.37	□□□□□ -1.87
CAF16	P43569	ZEO1	YOL109W	342 nt		3.37	□□□□□ -1.87
CAF16	P43569	ROY1	YMR258C	1662 nt		3.36	□□□□□ -1.87
CAF16	P43569	APC11	YDL008W	498 nt		3.36	□□□□□ -1.87
CAF16	P43569	ERG28	YER044C	447 nt		3.36	□□□□□ -1.87
CAF16	P43569	REC104	YHR157W	549 nt		3.36	□□□□□ -1.87
CAF16	P43569	YHR214W-A	YHR214W-A	486 nt		3.36	□□□□□ -1.87
CAF16	P43569	UTP11	YKL099C	753 nt		3.36	□□□□□ -1.87
CAF16	P43569	YAR068W	YAR068W	486 nt		3.36	□□□□□ -1.87
CAF16	P43569	YLR434C	YLR434C	384 nt		3.36	□□□□□ -1.87

Retrieved 100 of 7,029 protein–RNA pairs in 34 ms