Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.43■□□□□ 0.54
CSNK1A1P48729 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSNK1A1P48729 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CSNK1A1P48729 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.43■□□□□ 0.54
CSNK1A1P48729 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CSNK1A1P48729 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CSNK1A1P48729 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CSNK1A1P48729 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.42■□□□□ 0.54
CSNK1A1P48729 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.42■□□□□ 0.54
CSNK1A1P48729 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CSNK1A1P48729 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.42■□□□□ 0.54
CSNK1A1P48729 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CSNK1A1P48729 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.41■□□□□ 0.54
CSNK1A1P48729 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.41■□□□□ 0.54
CSNK1A1P48729 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.41■□□□□ 0.54
CSNK1A1P48729 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.41■□□□□ 0.54
CSNK1A1P48729 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.41■□□□□ 0.54
CSNK1A1P48729 UBE2DNL-204ENST00000602536 740 ntBASIC18.41■□□□□ 0.54
CSNK1A1P48729 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CSNK1A1P48729 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 MIR935-201ENST00000401179 91 ntBASIC18.4■□□□□ 0.54
CSNK1A1P48729 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 AC137761.2-201ENST00000561729 223 ntBASIC18.4■□□□□ 0.54
CSNK1A1P48729 SLC7A5P1-201ENST00000568957 537 ntBASIC18.4■□□□□ 0.54
CSNK1A1P48729 AC145350.3-201ENST00000569033 163 ntBASIC18.4■□□□□ 0.54
CSNK1A1P48729 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 RARRES2P11-201ENST00000635158 484 ntBASIC18.4■□□□□ 0.54
CSNK1A1P48729 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.4■□□□□ 0.54
CSNK1A1P48729 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CSNK1A1P48729 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
CSNK1A1P48729 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.39■□□□□ 0.54
CSNK1A1P48729 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.39■□□□□ 0.53
CSNK1A1P48729 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.39■□□□□ 0.53
CSNK1A1P48729 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.39■□□□□ 0.53
CSNK1A1P48729 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CSNK1A1P48729 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 AL162430.1-201ENST00000480705 870 ntBASIC18.39■□□□□ 0.53
CSNK1A1P48729 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.39■□□□□ 0.53
CSNK1A1P48729 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.39■□□□□ 0.53
CSNK1A1P48729 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 MYCNOS-205ENST00000641950 531 ntBASIC18.39■□□□□ 0.53
CSNK1A1P48729 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 AC121338.2-201ENST00000622535 1744 ntBASIC18.39■□□□□ 0.53
CSNK1A1P48729 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.39■□□□□ 0.53
CSNK1A1P48729 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.39■□□□□ 0.53
CSNK1A1P48729 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CSNK1A1P48729 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CSNK1A1P48729 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CSNK1A1P48729 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms