Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 RPB11YOL005C 363 nt2.04□□□□□ -2.08
TY1B-HO13535 CNS1YBR155W 1158 nt2.04□□□□□ -2.08
TY1B-HO13535 YDL199CYDL199C 2064 nt2.04□□□□□ -2.08
TY1B-HO13535 YNL011CYNL011C 1335 nt2.04□□□□□ -2.08
TY1B-HO13535 ITT1YML068W 1395 nt2.04□□□□□ -2.08
TY1B-HO13535 SPB4YFL002C 1821 nt2.04□□□□□ -2.08
TY1B-HO13535 TPO5YKL174C 1857 nt2.04□□□□□ -2.08
TY1B-HO13535 21S_rRNA21S_rRNA 3296 nt2.03□□□□□ -2.08
TY1B-HO13535 LHS1YKL073W 2646 nt2.03□□□□□ -2.08
TY1B-HO13535 YOL035CYOL035C 303 nt2.03□□□□□ -2.09
TY1B-HO13535 SNO1YMR095C 675 nt2.02□□□□□ -2.09
TY1B-HO13535 RRP14YKL082C 1305 nt2.02□□□□□ -2.09
TY1B-HO13535 EAP1YKL204W 1899 nt2.02□□□□□ -2.09
TY1B-HO13535 MLP2YIL149C 5040 nt2.01□□□□□ -2.09
TY1B-HO13535 PLC1YPL268W 2610 nt2.01□□□□□ -2.09
TY1B-HO13535 ARR2YPR200C 393 nt2.01□□□□□ -2.09
TY1B-HO13535 GRX2YDR513W 432 nt2□□□□□ -2.09
TY1B-HO13535 INA22YIR024C 651 nt2□□□□□ -2.09
TY1B-HO13535 YLR124WYLR124W 345 nt2□□□□□ -2.09
TY1B-HO13535 YNL109WYNL109W 546 nt2□□□□□ -2.09
TY1B-HO13535 GAS2YLR343W 1668 nt2□□□□□ -2.09
TY1B-HO13535 SHE9YDR393W 1371 nt2□□□□□ -2.09
TY1B-HO13535 SLM1YIL105C 2061 nt2□□□□□ -2.09
TY1B-HO13535 UTP5YDR398W 1932 nt1.99□□□□□ -2.09
TY1B-HO13535 YHR180W-AYHR180W-A 183 nt1.99□□□□□ -2.09
TY1B-HO13535 TSR4YOL022C 1227 nt1.99□□□□□ -2.09
TY1B-HO13535 YOL134CYOL134C 390 nt1.99□□□□□ -2.09
TY1B-HO13535 POL5YEL055C 3069 nt1.99□□□□□ -2.09
TY1B-HO13535 MDM32YOR147W 1869 nt1.99□□□□□ -2.09
TY1B-HO13535 UFD2YDL190C 2886 nt1.98□□□□□ -2.09
TY1B-HO13535 SPC98YNL126W 2541 nt1.98□□□□□ -2.09
TY1B-HO13535 YDR179W-AYDR179W-A 1392 nt1.98□□□□□ -2.09
TY1B-HO13535 AGC1YPR021C 2709 nt1.98□□□□□ -2.09
TY1B-HO13535 SRD1YCR018C 666 nt1.98□□□□□ -2.09
TY1B-HO13535 YDR169C-AYDR169C-A 150 nt1.98□□□□□ -2.09
TY1B-HO13535 YLR154W-AYLR154W-A 186 nt1.98□□□□□ -2.09
TY1B-HO13535 YLR224WYLR224W 1110 nt1.98□□□□□ -2.09
TY1B-HO13535 HSP10YOR020C 321 nt1.98□□□□□ -2.09
TY1B-HO13535 YPL071CYPL071C 471 nt1.98□□□□□ -2.09
TY1B-HO13535 UTP13YLR222C 2454 nt1.97□□□□□ -2.09
TY1B-HO13535 SMT3YDR510W 306 nt1.97□□□□□ -2.09
TY1B-HO13535 CSE4YKL049C 690 nt1.97□□□□□ -2.09
TY1B-HO13535 REV1YOR346W 2958 nt1.96□□□□□ -2.1
TY1B-HO13535 UTP20YBL004W 7482 nt1.96□□□□□ -2.1
TY1B-HO13535 BUD30YDL151C 582 nt1.96□□□□□ -2.1
TY1B-HO13535 CTH1YDR151C 978 nt1.95□□□□□ -2.1
TY1B-HO13535 MBA1YBR185C 837 nt1.95□□□□□ -2.1
TY1B-HO13535 ECM18YDR125C 1362 nt1.95□□□□□ -2.1
TY1B-HO13535 AFI1YOR129C 2682 nt1.95□□□□□ -2.1
TY1B-HO13535 GRX3YDR098C 858 nt1.95□□□□□ -2.1
TY1B-HO13535 SNO3YFL060C 669 nt1.95□□□□□ -2.1
TY1B-HO13535 tQ(UUG)E2tQ(UUG)E2 72 nt1.95□□□□□ -2.1
TY1B-HO13535 SEN15YMR059W 387 nt1.95□□□□□ -2.1
TY1B-HO13535 SNO2YNL334C 669 nt1.95□□□□□ -2.1
TY1B-HO13535 tF(GAA)BtF(GAA)B 73 nt1.94□□□□□ -2.1
TY1B-HO13535 tF(GAA)FtF(GAA)F 73 nt1.94□□□□□ -2.1
TY1B-HO13535 tF(GAA)GtF(GAA)G 73 nt1.94□□□□□ -2.1
TY1B-HO13535 tF(GAA)H1tF(GAA)H1 73 nt1.94□□□□□ -2.1
TY1B-HO13535 tF(GAA)H2tF(GAA)H2 73 nt1.94□□□□□ -2.1
TY1B-HO13535 tF(GAA)MtF(GAA)M 73 nt1.94□□□□□ -2.1
TY1B-HO13535 tF(GAA)P1tF(GAA)P1 73 nt1.94□□□□□ -2.1
TY1B-HO13535 tF(GAA)P2tF(GAA)P2 73 nt1.94□□□□□ -2.1
TY1B-HO13535 COQ10YOL008W 624 nt1.94□□□□□ -2.1
TY1B-HO13535 MMS22YLR320W 4365 nt1.94□□□□□ -2.1
TY1B-HO13535 VPS38YLR360W 1320 nt1.94□□□□□ -2.1
TY1B-HO13535 PET100YDR079W 336 nt1.93□□□□□ -2.1
TY1B-HO13535 VMA6YLR447C 1038 nt1.93□□□□□ -2.1
TY1B-HO13535 EAF7YNL136W 1278 nt1.93□□□□□ -2.1
TY1B-HO13535 YRR1YOR162C 2433 nt1.93□□□□□ -2.1
TY1B-HO13535 VPS15YBR097W 4365 nt1.93□□□□□ -2.1
TY1B-HO13535 YJR061WYJR061W 2808 nt1.93□□□□□ -2.1
TY1B-HO13535 TIM9YEL020W-A 264 nt1.93□□□□□ -2.1
TY1B-HO13535 VMA10YHR039C-A 345 nt1.93□□□□□ -2.1
TY1B-HO13535 CRS5YOR031W 210 nt1.93□□□□□ -2.1
TY1B-HO13535 YPL073CYPL073C 486 nt1.93□□□□□ -2.1
TY1B-HO13535 HOP1YIL072W 1818 nt1.92□□□□□ -2.1
TY1B-HO13535 RGL1YPL066W 1440 nt1.92□□□□□ -2.1
TY1B-HO13535 YNL143CYNL143C 393 nt1.92□□□□□ -2.1
TY1B-HO13535 YIL080WYIL080W 4722 nt1.92□□□□□ -2.1
TY1B-HO13535 RRF1YHR038W 693 nt1.91□□□□□ -2.1
TY1B-HO13535 YNL046WYNL046W 519 nt1.91□□□□□ -2.1
TY1B-HO13535 YNL184CYNL184C 327 nt1.91□□□□□ -2.1
TY1B-HO13535 YHR214C-CYHR214C-C 1437 nt1.91□□□□□ -2.1
TY1B-HO13535 ANR2YKL047W 1551 nt1.91□□□□□ -2.1
TY1B-HO13535 EST3YIL009C-A 546 nt1.9□□□□□ -2.1
TY1B-HO13535 YOL166CYOL166C 339 nt1.9□□□□□ -2.1
TY1B-HO13535 MAK5YBR142W 2322 nt1.9□□□□□ -2.11
TY1B-HO13535 YGL262WYGL262W 528 nt1.9□□□□□ -2.11
TY1B-HO13535 MRPL9YGR220C 810 nt1.9□□□□□ -2.11
TY1B-HO13535 YIL156W-AYIL156W-A 402 nt1.9□□□□□ -2.11
TY1B-HO13535 RMP1YLR145W 606 nt1.9□□□□□ -2.11
TY1B-HO13535 YBL081WYBL081W 1107 nt1.9□□□□□ -2.11
TY1B-HO13535 MRPL27YBR282W 441 nt1.9□□□□□ -2.11
TY1B-HO13535 GRX1YCL035C 333 nt1.9□□□□□ -2.11
TY1B-HO13535 AVT2YEL064C 1443 nt1.9□□□□□ -2.11
TY1B-HO13535 YCK3YER123W 1575 nt1.89□□□□□ -2.11
TY1B-HO13535 YDR340WYDR340W 303 nt1.89□□□□□ -2.11
TY1B-HO13535 VPH2YKL119C 648 nt1.89□□□□□ -2.11
TY1B-HO13535 ESF2YNR054C 951 nt1.89□□□□□ -2.11
TY1B-HO13535 PLP1YDR183W 693 nt1.88□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 63.8 ms