Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 AL117332.1-201ENST00000622628 974 ntBASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 AL162377.1-201ENST00000618844 1793 ntBASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 AC116562.4-201ENST00000641316 2276 ntBASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.68■□□□□ 0.26
SCRT1Q9BWW7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 TNXA-203ENST00000507684 2038 ntBASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT1Q9BWW7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCRT1Q9BWW7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 UNC93B8-201ENST00000511903 705 ntBASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 MIR6724-1-201ENST00000616420 92 ntBASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 MIR6724-2-201ENST00000616483 92 ntBASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 MIR6724-4-201ENST00000617390 92 ntBASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 MIR6724-3-201ENST00000622482 92 ntBASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCRT1Q9BWW7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SCRT1Q9BWW7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 AP000974.1-201ENST00000623909 2387 ntBASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.64■□□□□ 0.25
SCRT1Q9BWW7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms