Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.8■□□□□ 0.92
HMGCLP35914 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 RBM17P2-201ENST00000616397 1405 ntBASIC20.8■□□□□ 0.92
HMGCLP35914 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
HMGCLP35914 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCLP35914 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCLP35914 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.8■□□□□ 0.92
HMGCLP35914 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.8■□□□□ 0.92
HMGCLP35914 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGCLP35914 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HMGCLP35914 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCLP35914 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.8■□□□□ 0.92
HMGCLP35914 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
HMGCLP35914 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCLP35914 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
HMGCLP35914 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCLP35914 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCLP35914 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.79■□□□□ 0.92
HMGCLP35914 MFSD11-216ENST00000590393 1141 ntBASIC20.79■□□□□ 0.92
HMGCLP35914 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
HMGCLP35914 IKBKGP1-201ENST00000612193 1073 ntBASIC20.79■□□□□ 0.92
HMGCLP35914 AL137060.1-201ENST00000618151 2648 ntBASIC20.79■□□□□ 0.92
HMGCLP35914 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCLP35914 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCLP35914 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGCLP35914 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLP35914 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLP35914 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HMGCLP35914 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLP35914 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLP35914 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLP35914 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.78■□□□□ 0.92
HMGCLP35914 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.78■□□□□ 0.92
HMGCLP35914 BID-214ENST00000617586 542 ntTSL 5 BASIC20.78■□□□□ 0.92
HMGCLP35914 AC010536.3-201ENST00000620306 533 ntBASIC20.78■□□□□ 0.92
HMGCLP35914 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HMGCLP35914 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCLP35914 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.78■□□□□ 0.92
HMGCLP35914 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.78■□□□□ 0.92
HMGCLP35914 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCLP35914 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCLP35914 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCLP35914 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCLP35914 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
HMGCLP35914 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
HMGCLP35914 AC011767.1-201ENST00000617410 1153 ntBASIC20.77■□□□□ 0.92
HMGCLP35914 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCLP35914 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
HMGCLP35914 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.77■□□□□ 0.92
HMGCLP35914 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HMGCLP35914 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.77■□□□□ 0.91
HMGCLP35914 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.77■□□□□ 0.91
HMGCLP35914 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.76■□□□□ 0.91
HMGCLP35914 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HMGCLP35914 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HMGCLP35914 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGCLP35914 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGCLP35914 TERF1P5-201ENST00000477545 1207 ntBASIC20.76■□□□□ 0.91
HMGCLP35914 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HMGCLP35914 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HMGCLP35914 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
HMGCLP35914 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.76■□□□□ 0.91
HMGCLP35914 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGCLP35914 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCLP35914 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGCLP35914 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLP35914 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HMGCLP35914 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLP35914 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLP35914 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLP35914 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGCLP35914 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLP35914 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLP35914 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCLP35914 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
HMGCLP35914 AL137784.2-201ENST00000607332 1000 ntBASIC20.75■□□□□ 0.91
HMGCLP35914 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms