Protein–RNA interactions for Protein: Q04839

GFD1, mRNA transport factor GFD1, yeastyeast

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GFD1Q04839 VPS30YPL120W 1674 nt3.59□□□□□ -1.83
GFD1Q04839 YNR063WYNR063W 1824 nt3.59□□□□□ -1.83
GFD1Q04839 YLR177WYLR177W 1887 nt3.59□□□□□ -1.83
GFD1Q04839 SDH3YKL141W 597 nt3.59□□□□□ -1.83
GFD1Q04839 PIR1YKL164C 1026 nt3.59□□□□□ -1.83
GFD1Q04839 YMR122W-AYMR122W-A 255 nt3.59□□□□□ -1.83
GFD1Q04839 TOM22YNL131W 459 nt3.59□□□□□ -1.83
GFD1Q04839 SNU56YDR240C 1479 nt3.59□□□□□ -1.84
GFD1Q04839 SUC2YIL162W 1599 nt3.59□□□□□ -1.84
GFD1Q04839 HFD1YMR110C 1599 nt3.59□□□□□ -1.84
GFD1Q04839 GSC2YGR032W 5688 nt3.58□□□□□ -1.84
GFD1Q04839 DNM1YLL001W 2274 nt3.58□□□□□ -1.84
GFD1Q04839 SIP1YDR422C 2448 nt3.58□□□□□ -1.84
GFD1Q04839 VMA8YEL051W 771 nt3.58□□□□□ -1.84
GFD1Q04839 YGR228WYGR228W 345 nt3.58□□□□□ -1.84
GFD1Q04839 ASG7YJL170C 630 nt3.58□□□□□ -1.84
GFD1Q04839 YNR034W-AYNR034W-A 297 nt3.58□□□□□ -1.84
GFD1Q04839 GRE2YOL151W 1029 nt3.58□□□□□ -1.84
GFD1Q04839 GCY1YOR120W 939 nt3.58□□□□□ -1.84
GFD1Q04839 YOR343W-AYOR343W-A 1317 nt3.58□□□□□ -1.84
GFD1Q04839 YKL075CYKL075C 1353 nt3.58□□□□□ -1.84
GFD1Q04839 ARP4YJL081C 1470 nt3.58□□□□□ -1.84
GFD1Q04839 CIN8YEL061C 3003 nt3.58□□□□□ -1.84
GFD1Q04839 FUS2YMR232W 2034 nt3.58□□□□□ -1.84
GFD1Q04839 ZDS2YML109W 2829 nt3.57□□□□□ -1.84
GFD1Q04839 MIG3YER028C 1185 nt3.57□□□□□ -1.84
GFD1Q04839 YER046W-AYER046W-A 330 nt3.57□□□□□ -1.84
GFD1Q04839 SPO13YHR014W 876 nt3.57□□□□□ -1.84
GFD1Q04839 AIM26YKL037W 357 nt3.57□□□□□ -1.84
GFD1Q04839 LST4YKL176C 2487 nt3.57□□□□□ -1.84
GFD1Q04839 YNL046WYNL046W 519 nt3.57□□□□□ -1.84
GFD1Q04839 PHO80YOL001W 882 nt3.57□□□□□ -1.84
GFD1Q04839 YOR192C-AYOR192C-A 1317 nt3.57□□□□□ -1.84
GFD1Q04839 CMD1YBR109C 444 nt3.57□□□□□ -1.84
GFD1Q04839 SHG1YBR258C 429 nt3.57□□□□□ -1.84
GFD1Q04839 LRG1YDL240W 3054 nt3.57□□□□□ -1.84
GFD1Q04839 TPO5YKL174C 1857 nt3.56□□□□□ -1.84
GFD1Q04839 YDR115WYDR115W 318 nt3.56□□□□□ -1.84
GFD1Q04839 NTF2YER009W 378 nt3.56□□□□□ -1.84
GFD1Q04839 TDA2YER071C 381 nt3.56□□□□□ -1.84
GFD1Q04839 COX13YGL191W 390 nt3.56□□□□□ -1.84
GFD1Q04839 RSR1YGR152C 819 nt3.56□□□□□ -1.84
GFD1Q04839 YHL009W-AYHL009W-A 1242 nt3.56□□□□□ -1.84
GFD1Q04839 MRP8YKL142W 660 nt3.56□□□□□ -1.84
GFD1Q04839 YKE2YLR200W 345 nt3.56□□□□□ -1.84
GFD1Q04839 NNT1YLR285W 786 nt3.56□□□□□ -1.84
GFD1Q04839 BER1YLR412W 825 nt3.56□□□□□ -1.84
GFD1Q04839 IGO1YNL157W 507 nt3.56□□□□□ -1.84
GFD1Q04839 AKR1YDR264C 2295 nt3.56□□□□□ -1.84
GFD1Q04839 YTA7YGR270W 4140 nt3.56□□□□□ -1.84
GFD1Q04839 SIN4YNL236W 2925 nt3.56□□□□□ -1.84
GFD1Q04839 YKL050CYKL050C 2769 nt3.56□□□□□ -1.84
GFD1Q04839 SIZ1YDR409W 2715 nt3.56□□□□□ -1.84
GFD1Q04839 YML096WYML096W 1578 nt3.55□□□□□ -1.84
GFD1Q04839 YJR030CYJR030C 2238 nt3.55□□□□□ -1.84
GFD1Q04839 YDL199CYDL199C 2064 nt3.55□□□□□ -1.84
GFD1Q04839 YNL284C-AYNL284C-A 1323 nt3.55□□□□□ -1.84
GFD1Q04839 YDR114CYDR114C 303 nt3.55□□□□□ -1.84
GFD1Q04839 YJR111CYJR111C 852 nt3.55□□□□□ -1.84
GFD1Q04839 YPL107WYPL107W 747 nt3.55□□□□□ -1.84
GFD1Q04839 YPR136CYPR136C 513 nt3.55□□□□□ -1.84
GFD1Q04839 YMR317WYMR317W 3423 nt3.55□□□□□ -1.84
GFD1Q04839 ATG26YLR189C 3597 nt3.55□□□□□ -1.84
GFD1Q04839 SKO1YNL167C 1944 nt3.54□□□□□ -1.84
GFD1Q04839 YHR080CYHR080C 4038 nt3.54□□□□□ -1.84
GFD1Q04839 MET32YDR253C 576 nt3.54□□□□□ -1.84
GFD1Q04839 YER175W-AYER175W-A 165 nt3.54□□□□□ -1.84
GFD1Q04839 ACF4YJR083C 930 nt3.54□□□□□ -1.84
GFD1Q04839 ENV10YLR065C 546 nt3.54□□□□□ -1.84
GFD1Q04839 NSP1YJL041W 2472 nt3.54□□□□□ -1.84
GFD1Q04839 PEX1YKL197C 3132 nt3.54□□□□□ -1.84
GFD1Q04839 VID27YNL212W 2349 nt3.54□□□□□ -1.84
GFD1Q04839 RNT1YMR239C 1416 nt3.53□□□□□ -1.84
GFD1Q04839 PWP2YCR057C 2772 nt3.53□□□□□ -1.84
GFD1Q04839 GAL80YML051W 1308 nt3.53□□□□□ -1.84
GFD1Q04839 15S_rRNA15S_rRNA 1649 nt3.53□□□□□ -1.84
GFD1Q04839 YDL032WYDL032W 312 nt3.53□□□□□ -1.84
GFD1Q04839 VPS74YDR372C 1038 nt3.53□□□□□ -1.84
GFD1Q04839 YDR431WYDR431W 312 nt3.53□□□□□ -1.84
GFD1Q04839 SLD5YDR489W 885 nt3.53□□□□□ -1.84
GFD1Q04839 tK(UUU)DtK(UUU)D 73 nt3.53□□□□□ -1.84
GFD1Q04839 tK(UUU)G1tK(UUU)G1 73 nt3.53□□□□□ -1.84
GFD1Q04839 tK(UUU)G2tK(UUU)G2 73 nt3.53□□□□□ -1.84
GFD1Q04839 tK(UUU)KtK(UUU)K 73 nt3.53□□□□□ -1.84
GFD1Q04839 tK(UUU)LtK(UUU)L 73 nt3.53□□□□□ -1.84
GFD1Q04839 tK(UUU)OtK(UUU)O 73 nt3.53□□□□□ -1.84
GFD1Q04839 tK(UUU)PtK(UUU)P 73 nt3.53□□□□□ -1.84
GFD1Q04839 FMP32YFL046W 624 nt3.53□□□□□ -1.84
GFD1Q04839 AGA2YGL032C 264 nt3.53□□□□□ -1.84
GFD1Q04839 RPL9AYGL147C 576 nt3.53□□□□□ -1.84
GFD1Q04839 MTM1YGR257C 1101 nt3.53□□□□□ -1.84
GFD1Q04839 YIR020C-BYIR020C-B 735 nt3.53□□□□□ -1.84
GFD1Q04839 NFU1YKL040C 771 nt3.53□□□□□ -1.84
GFD1Q04839 ARC18YLR370C 537 nt3.53□□□□□ -1.84
GFD1Q04839 LEE1YPL054W 906 nt3.53□□□□□ -1.84
GFD1Q04839 DAP2YHR028C 2457 nt3.53□□□□□ -1.84
GFD1Q04839 RRN7YJL025W 1545 nt3.53□□□□□ -1.84
GFD1Q04839 KAP95YLR347C 2586 nt3.53□□□□□ -1.85
GFD1Q04839 MET10YFR030W 3108 nt3.53□□□□□ -1.85
GFD1Q04839 RPL16AYIL133C 600 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 73 ms