Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
ZC3H6P61129 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
ZC3H6P61129 COMT-203ENST00000403184 2217 ntTSL 2 BASIC28.18■■■□□ 2.1
ZC3H6P61129 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H6P61129 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
ZC3H6P61129 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC28.17■■■□□ 2.1
ZC3H6P61129 MFF-205ENST00000354503 1085 ntTSL 2 BASIC28.17■■■□□ 2.1
ZC3H6P61129 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC28.17■■■□□ 2.1
ZC3H6P61129 SLC29A4P2-201ENST00000504749 1089 ntBASIC28.17■■■□□ 2.1
ZC3H6P61129 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZC3H6P61129 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC28.17■■■□□ 2.1
ZC3H6P61129 SOX15-203ENST00000570788 1093 ntBASIC28.17■■■□□ 2.1
ZC3H6P61129 REXO1L12P-201ENST00000622156 912 ntBASIC28.17■■■□□ 2.1
ZC3H6P61129 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZC3H6P61129 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZC3H6P61129 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
ZC3H6P61129 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZC3H6P61129 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZC3H6P61129 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ZC3H6P61129 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
ZC3H6P61129 MIR1224-201ENST00000408193 85 ntBASIC28.16■■■□□ 2.1
ZC3H6P61129 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
ZC3H6P61129 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZC3H6P61129 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ZC3H6P61129 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC28.15■■■□□ 2.1
ZC3H6P61129 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZC3H6P61129 AC093323.1-202ENST00000635031 2045 ntBASIC28.15■■■□□ 2.1
ZC3H6P61129 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ZC3H6P61129 AC245052.3-201ENST00000450182 901 ntBASIC28.15■■■□□ 2.1
ZC3H6P61129 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC28.15■■■□□ 2.1
ZC3H6P61129 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZC3H6P61129 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ZC3H6P61129 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZC3H6P61129 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZC3H6P61129 KRT18P68-201ENST00000392293 1000 ntBASIC28.14■■■□□ 2.1
ZC3H6P61129 AC069544.1-201ENST00000609399 999 ntBASIC28.14■■■□□ 2.1
ZC3H6P61129 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC28.14■■■□□ 2.1
ZC3H6P61129 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZC3H6P61129 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZC3H6P61129 FAM210CP-201ENST00000445714 574 ntBASIC28.13■■■□□ 2.09
ZC3H6P61129 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC28.13■■■□□ 2.09
ZC3H6P61129 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC28.13■■■□□ 2.09
ZC3H6P61129 OR2A1-AS1-207ENST00000486094 819 ntBASIC28.13■■■□□ 2.09
ZC3H6P61129 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC28.13■■■□□ 2.09
ZC3H6P61129 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZC3H6P61129 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ZC3H6P61129 C11orf96-202ENST00000528572 1834 ntBASIC28.13■■■□□ 2.09
ZC3H6P61129 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC28.13■■■□□ 2.09
ZC3H6P61129 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZC3H6P61129 GCK-205ENST00000437084 1385 ntTSL 5 BASIC28.12■■■□□ 2.09
ZC3H6P61129 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
ZC3H6P61129 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H6P61129 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H6P61129 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H6P61129 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H6P61129 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H6P61129 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC28.12■■■□□ 2.09
ZC3H6P61129 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC28.12■■■□□ 2.09
ZC3H6P61129 REXO2-208ENST00000539754 791 ntTSL 2 BASIC28.12■■■□□ 2.09
ZC3H6P61129 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC28.12■■■□□ 2.09
ZC3H6P61129 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC28.12■■■□□ 2.09
ZC3H6P61129 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
ZC3H6P61129 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZC3H6P61129 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC28.11■■■□□ 2.09
ZC3H6P61129 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC28.11■■■□□ 2.09
ZC3H6P61129 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZC3H6P61129 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC28.11■■■□□ 2.09
ZC3H6P61129 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZC3H6P61129 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ZC3H6P61129 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ZC3H6P61129 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC28.11■■■□□ 2.09
ZC3H6P61129 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
ZC3H6P61129 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.1■■■□□ 2.09
ZC3H6P61129 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ZC3H6P61129 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZC3H6P61129 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZC3H6P61129 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC28.1■■■□□ 2.09
ZC3H6P61129 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
ZC3H6P61129 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
ZC3H6P61129 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
ZC3H6P61129 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC28.1■■■□□ 2.09
ZC3H6P61129 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ZC3H6P61129 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
ZC3H6P61129 AC026471.6-201ENST00000622954 1905 ntBASIC28.1■■■□□ 2.09
ZC3H6P61129 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZC3H6P61129 NFE2L3P1-201ENST00000588207 1959 ntBASIC28.1■■■□□ 2.09
ZC3H6P61129 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
ZC3H6P61129 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZC3H6P61129 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
ZC3H6P61129 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZC3H6P61129 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ZC3H6P61129 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZC3H6P61129 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ZC3H6P61129 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZC3H6P61129 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC28.08■■■□□ 2.09
ZC3H6P61129 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H6P61129 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H6P61129 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZC3H6P61129 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
ZC3H6P61129 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms