Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 snR68snR68 136 nt2.41□□□□□ -2.02
UFD1P53044 HPA3YEL066W 540 nt2.41□□□□□ -2.02
UFD1P53044 YFR057WYFR057W 456 nt2.41□□□□□ -2.02
UFD1P53044 COG7YGL005C 840 nt2.41□□□□□ -2.02
UFD1P53044 OST5YGL226C-A 261 nt2.41□□□□□ -2.02
UFD1P53044 YLL037WYLL037W 381 nt2.41□□□□□ -2.02
UFD1P53044 RPL8BYLL045C 771 nt2.41□□□□□ -2.02
UFD1P53044 YLR339CYLR339C 552 nt2.41□□□□□ -2.02
UFD1P53044 RIM9YMR063W 720 nt2.41□□□□□ -2.02
UFD1P53044 HAT1YPL001W 1125 nt2.41□□□□□ -2.02
UFD1P53044 GEA1YJR031C 4227 nt2.41□□□□□ -2.02
UFD1P53044 VHR2YER064C 1518 nt2.41□□□□□ -2.02
UFD1P53044 YBR259WYBR259W 2067 nt2.4□□□□□ -2.02
UFD1P53044 CWC22YGR278W 1734 nt2.4□□□□□ -2.02
UFD1P53044 YJL049WYJL049W 1353 nt2.4□□□□□ -2.02
UFD1P53044 MNT3YIL014W 1893 nt2.4□□□□□ -2.03
UFD1P53044 YDL157CYDL157C 357 nt2.4□□□□□ -2.03
UFD1P53044 GUK1YDR454C 564 nt2.4□□□□□ -2.03
UFD1P53044 HMF1YER057C 390 nt2.4□□□□□ -2.03
UFD1P53044 NSA2YER126C 786 nt2.4□□□□□ -2.03
UFD1P53044 YFH7YFR007W 1062 nt2.4□□□□□ -2.03
UFD1P53044 YKL065W-AYKL065W-A 222 nt2.4□□□□□ -2.03
UFD1P53044 YKR070WYKR070W 1059 nt2.4□□□□□ -2.03
UFD1P53044 YLR366WYLR366W 306 nt2.4□□□□□ -2.03
UFD1P53044 COX14YML129C 213 nt2.4□□□□□ -2.03
UFD1P53044 YMR194C-AYMR194C-A 225 nt2.4□□□□□ -2.03
UFD1P53044 YNL276CYNL276C 396 nt2.4□□□□□ -2.03
UFD1P53044 ATG3YNR007C 933 nt2.4□□□□□ -2.03
UFD1P53044 YOR366WYOR366W 354 nt2.4□□□□□ -2.03
UFD1P53044 YBR090CYBR090C 369 nt2.4□□□□□ -2.03
UFD1P53044 YGL176CYGL176C 1665 nt2.4□□□□□ -2.03
UFD1P53044 GYL1YMR192W 2163 nt2.4□□□□□ -2.03
UFD1P53044 PIG2YIL045W 1617 nt2.39□□□□□ -2.03
UFD1P53044 NET1YJL076W 3570 nt2.39□□□□□ -2.03
UFD1P53044 DIA2YOR080W 2199 nt2.39□□□□□ -2.03
UFD1P53044 YCR045W-AYCR045W-A 351 nt2.39□□□□□ -2.03
UFD1P53044 SRB7YDR308C 423 nt2.39□□□□□ -2.03
UFD1P53044 YGR160WYGR160W 612 nt2.39□□□□□ -2.03
UFD1P53044 RPA12YJR063W 378 nt2.39□□□□□ -2.03
UFD1P53044 SUB1YMR039C 879 nt2.39□□□□□ -2.03
UFD1P53044 MRPL33YMR286W 261 nt2.39□□□□□ -2.03
UFD1P53044 YSF3YNL138W-A 258 nt2.39□□□□□ -2.03
UFD1P53044 SFG1YOR315W 1041 nt2.39□□□□□ -2.03
UFD1P53044 CUP9YPL177C 921 nt2.39□□□□□ -2.03
UFD1P53044 LTP1YPR073C 486 nt2.39□□□□□ -2.03
UFD1P53044 snR35snR35 204 nt2.39□□□□□ -2.03
UFD1P53044 SRP68YPL243W 1800 nt2.39□□□□□ -2.03
UFD1P53044 YDR170W-AYDR170W-A 1323 nt2.39□□□□□ -2.03
UFD1P53044 YBL005W-AYBL005W-A 1323 nt2.39□□□□□ -2.03
UFD1P53044 YMR046CYMR046C 1323 nt2.39□□□□□ -2.03
UFD1P53044 YNL284C-AYNL284C-A 1323 nt2.39□□□□□ -2.03
UFD1P53044 RTG3YBL103C 1461 nt2.39□□□□□ -2.03
UFD1P53044 VAC14YLR386W 2643 nt2.38□□□□□ -2.03
UFD1P53044 HSE1YHL002W 1359 nt2.38□□□□□ -2.03
UFD1P53044 TAF2YCR042C 4224 nt2.38□□□□□ -2.03
UFD1P53044 TVP15YDR100W 432 nt2.38□□□□□ -2.03
UFD1P53044 CWC23YGL128C 852 nt2.38□□□□□ -2.03
UFD1P53044 VMA7YGR020C 357 nt2.38□□□□□ -2.03
UFD1P53044 EFG1YGR271C-A 702 nt2.38□□□□□ -2.03
UFD1P53044 YGR293CYGR293C 462 nt2.38□□□□□ -2.03
UFD1P53044 YLR169WYLR169W 354 nt2.38□□□□□ -2.03
UFD1P53044 YNL109WYNL109W 546 nt2.38□□□□□ -2.03
UFD1P53044 ECM21YBL101C 3354 nt2.38□□□□□ -2.03
UFD1P53044 TPT1YOL102C 693 nt2.38□□□□□ -2.03
UFD1P53044 GCY1YOR120W 939 nt2.38□□□□□ -2.03
UFD1P53044 YDR034C-DYDR034C-D 5313 nt2.38□□□□□ -2.03
UFD1P53044 EXO84YBR102C 2262 nt2.38□□□□□ -2.03
UFD1P53044 ISW1YBR245C 3390 nt2.38□□□□□ -2.03
UFD1P53044 RSE1YML049C 4086 nt2.37□□□□□ -2.03
UFD1P53044 RPL13AYDL082W 600 nt2.37□□□□□ -2.03
UFD1P53044 YPD1YDL235C 504 nt2.37□□□□□ -2.03
UFD1P53044 COX6YHR051W 447 nt2.37□□□□□ -2.03
UFD1P53044 YKL033W-AYKL033W-A 711 nt2.37□□□□□ -2.03
UFD1P53044 YAL066WYAL066W 309 nt2.37□□□□□ -2.03
UFD1P53044 YNL226WYNL226W 411 nt2.37□□□□□ -2.03
UFD1P53044 YNL319WYNL319W 441 nt2.37□□□□□ -2.03
UFD1P53044 YOL114CYOL114C 609 nt2.37□□□□□ -2.03
UFD1P53044 YOR097CYOR097C 528 nt2.37□□□□□ -2.03
UFD1P53044 RIM13YMR154C 2184 nt2.37□□□□□ -2.03
UFD1P53044 TRM82YDR165W 1335 nt2.37□□□□□ -2.03
UFD1P53044 YNL011CYNL011C 1335 nt2.37□□□□□ -2.03
UFD1P53044 AXL1YPR122W 3627 nt2.37□□□□□ -2.03
UFD1P53044 TRA1YHR099W 11235 nt2.37□□□□□ -2.03
UFD1P53044 AVT5YBL089W 1380 nt2.36□□□□□ -2.03
UFD1P53044 MAK5YBR142W 2322 nt2.36□□□□□ -2.03
UFD1P53044 TCB2YNL087W 3537 nt2.36□□□□□ -2.03
UFD1P53044 ERP6YGL002W 651 nt2.36□□□□□ -2.03
UFD1P53044 MIG2YGL209W 1149 nt2.36□□□□□ -2.03
UFD1P53044 YGL218WYGL218W 651 nt2.36□□□□□ -2.03
UFD1P53044 YGL230CYGL230C 444 nt2.36□□□□□ -2.03
UFD1P53044 RPL14BYHL001W 417 nt2.36□□□□□ -2.03
UFD1P53044 YHL002C-AYHL002C-A 489 nt2.36□□□□□ -2.03
UFD1P53044 CTK2YJL006C 972 nt2.36□□□□□ -2.03
UFD1P53044 YJL114WYJL114W 681 nt2.36□□□□□ -2.03
UFD1P53044 YKL070WYKL070W 510 nt2.36□□□□□ -2.03
UFD1P53044 JIP3YLR331C 378 nt2.36□□□□□ -2.03
UFD1P53044 RPL6BYLR448W 531 nt2.36□□□□□ -2.03
UFD1P53044 YOL106WYOL106W 354 nt2.36□□□□□ -2.03
UFD1P53044 YOR387CYOR387C 621 nt2.36□□□□□ -2.03
UFD1P53044 PEX34YCL056C 435 nt2.36□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms