Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CSNK1A1P48729 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1A1P48729 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSNK1A1P48729 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1A1P48729 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 POU5F1P4-201ENST00000413175 1085 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 AC034268.1-201ENST00000441047 882 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSNK1A1P48729 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 DUX4L2-201ENST00000561772 1275 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 DUX4L6-201ENST00000626483 1275 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 DUX4L1-201ENST00000627662 1275 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 DUX4L8-201ENST00000629013 1275 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 DUX4L3-201ENST00000630187 1275 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 DUX4L7-201ENST00000630678 1275 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 DUX4L5-201ENST00000630834 1275 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CSNK1A1P48729 AP004607.4-201ENST00000530158 1459 ntBASIC18.58■□□□□ 0.56
CSNK1A1P48729 AC004854.2-201ENST00000608450 1441 ntBASIC18.57■□□□□ 0.56
CSNK1A1P48729 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1A1P48729 AF106564.1-201ENST00000607058 2553 ntBASIC18.57■□□□□ 0.56
CSNK1A1P48729 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1A1P48729 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 AC061975.6-201ENST00000579045 1553 ntBASIC18.57■□□□□ 0.56
CSNK1A1P48729 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1A1P48729 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1A1P48729 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 AC010141.2-201ENST00000452426 721 ntBASIC18.57■□□□□ 0.56
CSNK1A1P48729 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 AC120498.10-201ENST00000621827 505 ntBASIC18.57■□□□□ 0.56
CSNK1A1P48729 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1A1P48729 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1A1P48729 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSNK1A1P48729 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.57■□□□□ 0.56
CSNK1A1P48729 AC005229.4-201ENST00000610085 2198 ntBASIC18.57■□□□□ 0.56
CSNK1A1P48729 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CSNK1A1P48729 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1A1P48729 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.56■□□□□ 0.56
CSNK1A1P48729 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1A1P48729 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1A1P48729 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1A1P48729 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CSNK1A1P48729 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.56■□□□□ 0.56
CSNK1A1P48729 AP001160.3-201ENST00000601484 763 ntBASIC18.56■□□□□ 0.56
CSNK1A1P48729 AC087623.3-201ENST00000607047 1098 ntBASIC18.56■□□□□ 0.56
CSNK1A1P48729 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1A1P48729 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSNK1A1P48729 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CSNK1A1P48729 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.56■□□□□ 0.56
CSNK1A1P48729 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CSNK1A1P48729 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CSNK1A1P48729 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.55■□□□□ 0.56
CSNK1A1P48729 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.55■□□□□ 0.56
CSNK1A1P48729 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.55■□□□□ 0.56
CSNK1A1P48729 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.55■□□□□ 0.56
CSNK1A1P48729 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CSNK1A1P48729 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.55■□□□□ 0.56
CSNK1A1P48729 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.55■□□□□ 0.56
CSNK1A1P48729 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.55■□□□□ 0.56
CSNK1A1P48729 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSNK1A1P48729 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1A1P48729 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1A1P48729 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1A1P48729 KRT19P1-201ENST00000405746 1186 ntBASIC18.54■□□□□ 0.56
CSNK1A1P48729 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSNK1A1P48729 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 RARRES2P6-201ENST00000567333 442 ntBASIC18.54■□□□□ 0.56
CSNK1A1P48729 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CSNK1A1P48729 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms