Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 NUM1YDR150W 8247 nt2.61□□□□□ -1.99
RAD3P06839 SVL3YPL032C 2478 nt2.61□□□□□ -1.99
RAD3P06839 SST2YLR452C 2097 nt2.61□□□□□ -1.99
RAD3P06839 YEF3YLR249W 3135 nt2.61□□□□□ -1.99
RAD3P06839 UTP14YML093W 2700 nt2.61□□□□□ -1.99
RAD3P06839 VPS41YDR080W 2979 nt2.61□□□□□ -1.99
RAD3P06839 PRP18YGR006W 756 nt2.61□□□□□ -1.99
RAD3P06839 YKL162CYKL162C 1209 nt2.61□□□□□ -1.99
RAD3P06839 BET5YML077W 480 nt2.61□□□□□ -1.99
RAD3P06839 SRL1YOR247W 633 nt2.61□□□□□ -1.99
RAD3P06839 MSH4YFL003C 2637 nt2.61□□□□□ -1.99
RAD3P06839 RRI1YDL216C 1323 nt2.61□□□□□ -1.99
RAD3P06839 SLY41YOR307C 1362 nt2.61□□□□□ -1.99
RAD3P06839 ATP22YDR350C 2055 nt2.61□□□□□ -1.99
RAD3P06839 GEA1YJR031C 4227 nt2.6□□□□□ -1.99
RAD3P06839 CWC22YGR278W 1734 nt2.6□□□□□ -1.99
RAD3P06839 AIM6YDL237W 1173 nt2.6□□□□□ -1.99
RAD3P06839 COBQ0105 1158 nt2.6□□□□□ -1.99
RAD3P06839 YGL159WYGL159W 1113 nt2.6□□□□□ -1.99
RAD3P06839 RPA12YJR063W 378 nt2.6□□□□□ -1.99
RAD3P06839 YLR347W-AYLR347W-A 141 nt2.6□□□□□ -1.99
RAD3P06839 PSY3YLR376C 729 nt2.6□□□□□ -1.99
RAD3P06839 YNL234WYNL234W 1281 nt2.6□□□□□ -1.99
RAD3P06839 KAR5YMR065W 1515 nt2.59□□□□□ -1.99
RAD3P06839 SIP3YNL257C 3690 nt2.59□□□□□ -1.99
RAD3P06839 HMO1YDR174W 741 nt2.59□□□□□ -1.99
RAD3P06839 TCA17YEL048C 459 nt2.59□□□□□ -1.99
RAD3P06839 UPF3YGR072W 1164 nt2.59□□□□□ -1.99
RAD3P06839 YHR032W-AYHR032W-A 180 nt2.59□□□□□ -1.99
RAD3P06839 PEX18YHR160C 852 nt2.59□□□□□ -1.99
RAD3P06839 RNR2YJL026W 1200 nt2.59□□□□□ -1.99
RAD3P06839 ARC19YKL013C 516 nt2.59□□□□□ -1.99
RAD3P06839 YLR042CYLR042C 486 nt2.59□□□□□ -1.99
RAD3P06839 TPT1YOL102C 693 nt2.59□□□□□ -1.99
RAD3P06839 YBR201C-AYBR201C-A 204 nt2.59□□□□□ -1.99
RAD3P06839 UTP6YDR449C 1323 nt2.59□□□□□ -2
RAD3P06839 PHO2YDL106C 1680 nt2.59□□□□□ -2
RAD3P06839 POL4YCR014C 1749 nt2.59□□□□□ -2
RAD3P06839 AVT2YEL064C 1443 nt2.59□□□□□ -2
RAD3P06839 STN1YDR082W 1485 nt2.58□□□□□ -2
RAD3P06839 MAK5YBR142W 2322 nt2.58□□□□□ -2
RAD3P06839 HAA1YPR008W 2085 nt2.58□□□□□ -2
RAD3P06839 YBR259WYBR259W 2067 nt2.58□□□□□ -2
RAD3P06839 PET100YDR079W 336 nt2.58□□□□□ -2
RAD3P06839 MMF1YIL051C 438 nt2.58□□□□□ -2
RAD3P06839 LAC1YKL008C 1257 nt2.58□□□□□ -2
RAD3P06839 RRG7YOR305W 729 nt2.58□□□□□ -2
RAD3P06839 DPB3YBR278W 606 nt2.58□□□□□ -2
RAD3P06839 RRP7YCL031C 894 nt2.58□□□□□ -2
RAD3P06839 SEC16YPL085W 6588 nt2.58□□□□□ -2
RAD3P06839 YNL011CYNL011C 1335 nt2.58□□□□□ -2
RAD3P06839 TPS2YDR074W 2691 nt2.58□□□□□ -2
RAD3P06839 FAR11YNL127W 2862 nt2.58□□□□□ -2
RAD3P06839 BOI1YBL085W 2943 nt2.57□□□□□ -2
RAD3P06839 YKL066WYKL066W 444 nt2.57□□□□□ -2
RAD3P06839 EMC6YLL014W 327 nt2.57□□□□□ -2
RAD3P06839 MRPL33YMR286W 261 nt2.57□□□□□ -2
RAD3P06839 HAT1YPL001W 1125 nt2.57□□□□□ -2
RAD3P06839 SUT2YPR009W 807 nt2.57□□□□□ -2
RAD3P06839 SMY2YBR172C 2223 nt2.56□□□□□ -2
RAD3P06839 RPL27BYDR471W 411 nt2.56□□□□□ -2
RAD3P06839 IMP3YHR148W 552 nt2.56□□□□□ -2
RAD3P06839 YHR213WYHR213W 597 nt2.56□□□□□ -2
RAD3P06839 YLR154W-EYLR154W-E 204 nt2.56□□□□□ -2
RAD3P06839 CDC123YLR215C 1083 nt2.56□□□□□ -2
RAD3P06839 YAR062WYAR062W 597 nt2.56□□□□□ -2
RAD3P06839 PRM6YML047C 1059 nt2.56□□□□□ -2
RAD3P06839 ERV41YML067C 1059 nt2.56□□□□□ -2
RAD3P06839 ECM13YBL043W 774 nt2.56□□□□□ -2
RAD3P06839 YOR055WYOR055W 435 nt2.56□□□□□ -2
RAD3P06839 RPB8YOR224C 441 nt2.56□□□□□ -2
RAD3P06839 PIS1YPR113W 663 nt2.56□□□□□ -2
RAD3P06839 YBR209WYBR209W 318 nt2.56□□□□□ -2
RAD3P06839 IRA2YOL081W 9240 nt2.56□□□□□ -2
RAD3P06839 PEX5YDR244W 1839 nt2.56□□□□□ -2
RAD3P06839 YKU80YMR106C 1890 nt2.56□□□□□ -2
RAD3P06839 PDR1YGL013C 3207 nt2.55□□□□□ -2
RAD3P06839 PEX4YGR133W 552 nt2.55□□□□□ -2
RAD3P06839 YJL181WYJL181W 1836 nt2.55□□□□□ -2
RAD3P06839 YJR071WYJR071W 369 nt2.55□□□□□ -2
RAD3P06839 MCR1YKL150W 909 nt2.55□□□□□ -2
RAD3P06839 VMA9YCL005W-A 222 nt2.55□□□□□ -2
RAD3P06839 TRA1YHR099W 11235 nt2.55□□□□□ -2
RAD3P06839 SWR1YDR334W 4545 nt2.55□□□□□ -2
RAD3P06839 TOF1YNL273W 3717 nt2.55□□□□□ -2
RAD3P06839 RIT1YMR283C 1542 nt2.54□□□□□ -2
RAD3P06839 KHA1YJL094C 2622 nt2.54□□□□□ -2
RAD3P06839 YDR336WYDR336W 945 nt2.54□□□□□ -2
RAD3P06839 ASG7YJL170C 630 nt2.54□□□□□ -2
RAD3P06839 GAB1YLR459W 1185 nt2.54□□□□□ -2
RAD3P06839 PDR17YNL264C 1053 nt2.54□□□□□ -2
RAD3P06839 HSP10YOR020C 321 nt2.54□□□□□ -2
RAD3P06839 ARF3YOR094W 552 nt2.54□□□□□ -2
RAD3P06839 AIM4YBR194W 372 nt2.54□□□□□ -2
RAD3P06839 URB2YJR041C 3525 nt2.54□□□□□ -2
RAD3P06839 YOL057WYOL057W 2136 nt2.54□□□□□ -2
RAD3P06839 PDR11YIL013C 4236 nt2.53□□□□□ -2
RAD3P06839 YCR024C-BYCR024C-B 267 nt2.53□□□□□ -2
RAD3P06839 snR68snR68 136 nt2.53□□□□□ -2
RAD3P06839 RSM24YDR175C 960 nt2.53□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 72.5 ms