Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS1P04632 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.77■□□□□ 0.92
CAPNS1P04632 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS1P04632 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS1P04632 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS1P04632 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.77■□□□□ 0.92
CAPNS1P04632 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.77■□□□□ 0.92
CAPNS1P04632 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.77■□□□□ 0.92
CAPNS1P04632 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS1P04632 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CAPNS1P04632 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.77■□□□□ 0.91
CAPNS1P04632 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.77■□□□□ 0.91
CAPNS1P04632 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CAPNS1P04632 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CAPNS1P04632 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 CNN2P6-201ENST00000439038 900 ntBASIC20.76■□□□□ 0.91
CAPNS1P04632 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.76■□□□□ 0.91
CAPNS1P04632 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.76■□□□□ 0.91
CAPNS1P04632 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.76■□□□□ 0.91
CAPNS1P04632 SLC7A5P1-201ENST00000568957 537 ntBASIC20.76■□□□□ 0.91
CAPNS1P04632 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.76■□□□□ 0.91
CAPNS1P04632 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CAPNS1P04632 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.75■□□□□ 0.91
CAPNS1P04632 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.75■□□□□ 0.91
CAPNS1P04632 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.75■□□□□ 0.91
CAPNS1P04632 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CAPNS1P04632 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 RNA5SP413-201ENST00000516373 109 ntBASIC20.75■□□□□ 0.91
CAPNS1P04632 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CAPNS1P04632 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.75■□□□□ 0.91
CAPNS1P04632 AC105036.2-201ENST00000569468 176 ntBASIC20.75■□□□□ 0.91
CAPNS1P04632 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.75■□□□□ 0.91
CAPNS1P04632 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CAPNS1P04632 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CAPNS1P04632 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPNS1P04632 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS1P04632 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPNS1P04632 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPNS1P04632 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS1P04632 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS1P04632 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.74■□□□□ 0.91
CAPNS1P04632 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CAPNS1P04632 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.74■□□□□ 0.91
CAPNS1P04632 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.74■□□□□ 0.91
CAPNS1P04632 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS1P04632 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.74■□□□□ 0.91
CAPNS1P04632 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.74■□□□□ 0.91
CAPNS1P04632 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS1P04632 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.74■□□□□ 0.91
CAPNS1P04632 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.74■□□□□ 0.91
CAPNS1P04632 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CAPNS1P04632 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.73■□□□□ 0.91
CAPNS1P04632 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.73■□□□□ 0.91
CAPNS1P04632 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
CAPNS1P04632 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 UBE2DNL-204ENST00000602536 740 ntBASIC20.73■□□□□ 0.91
CAPNS1P04632 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
CAPNS1P04632 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.73■□□□□ 0.91
CAPNS1P04632 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CAPNS1P04632 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPNS1P04632 MIR4758-201ENST00000577688 71 ntBASIC20.72■□□□□ 0.91
CAPNS1P04632 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.72■□□□□ 0.91
CAPNS1P04632 AC104187.1-201ENST00000607510 612 ntBASIC20.72■□□□□ 0.91
CAPNS1P04632 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.72■□□□□ 0.91
CAPNS1P04632 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CAPNS1P04632 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CAPNS1P04632 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPNS1P04632 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPNS1P04632 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CAPNS1P04632 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CAPNS1P04632 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CAPNS1P04632 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.71■□□□□ 0.91
CAPNS1P04632 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms