Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.93■□□□□ 0.3
SMCO3A2RU48 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMCO3A2RU48 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SMCO3A2RU48 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.92■□□□□ 0.3
SMCO3A2RU48 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SMCO3A2RU48 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 TSPY9P-201ENST00000440215 945 ntBASIC16.92■□□□□ 0.3
SMCO3A2RU48 TSPY11P-201ENST00000442607 1045 ntBASIC16.92■□□□□ 0.3
SMCO3A2RU48 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.92■□□□□ 0.3
SMCO3A2RU48 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.92■□□□□ 0.3
SMCO3A2RU48 AC010997.5-201ENST00000609182 354 ntBASIC16.92■□□□□ 0.3
SMCO3A2RU48 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.92■□□□□ 0.3
SMCO3A2RU48 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SMCO3A2RU48 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMCO3A2RU48 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMCO3A2RU48 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMCO3A2RU48 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SMCO3A2RU48 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMCO3A2RU48 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMCO3A2RU48 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMCO3A2RU48 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.89■□□□□ 0.3
SMCO3A2RU48 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMCO3A2RU48 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SMCO3A2RU48 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.89■□□□□ 0.29
SMCO3A2RU48 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SMCO3A2RU48 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.89■□□□□ 0.29
SMCO3A2RU48 MIR4787-201ENST00000607364 84 ntBASIC16.89■□□□□ 0.29
SMCO3A2RU48 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 OXCT2P1-201ENST00000447263 1535 ntBASIC16.89■□□□□ 0.29
SMCO3A2RU48 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SMCO3A2RU48 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.89■□□□□ 0.29
SMCO3A2RU48 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 LINC01006-201ENST00000333319 2292 ntBASIC16.89■□□□□ 0.29
SMCO3A2RU48 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMCO3A2RU48 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMCO3A2RU48 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SMCO3A2RU48 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SMCO3A2RU48 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms