Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 ARP5YNL059C 2268 nt3.96□□□□□ -1.78
SSL2Q00578 APL4YPR029C 2499 nt3.96□□□□□ -1.78
SSL2Q00578 XRS2YDR369C 2565 nt3.96□□□□□ -1.78
SSL2Q00578 YCR013CYCR013C 648 nt3.96□□□□□ -1.78
SSL2Q00578 MET32YDR253C 576 nt3.96□□□□□ -1.78
SSL2Q00578 NCB2YDR397C 441 nt3.96□□□□□ -1.78
SSL2Q00578 IES5YER092W 378 nt3.96□□□□□ -1.78
SSL2Q00578 PRM8YGL053W 714 nt3.96□□□□□ -1.78
SSL2Q00578 YIL024CYIL024C 570 nt3.96□□□□□ -1.78
SSL2Q00578 YIR036W-AYIR036W-A 402 nt3.96□□□□□ -1.78
SSL2Q00578 ENT3YJR125C 1227 nt3.96□□□□□ -1.78
SSL2Q00578 HRI1YLR301W 735 nt3.96□□□□□ -1.78
SSL2Q00578 YNL146WYNL146W 303 nt3.96□□□□□ -1.78
SSL2Q00578 ASI2YNL159C 870 nt3.96□□□□□ -1.78
SSL2Q00578 YNL181WYNL181W 1224 nt3.96□□□□□ -1.78
SSL2Q00578 PHO80YOL001W 882 nt3.96□□□□□ -1.78
SSL2Q00578 snR17asnR17a 333 nt3.96□□□□□ -1.78
SSL2Q00578 AVT5YBL089W 1380 nt3.96□□□□□ -1.78
SSL2Q00578 YPL109CYPL109C 1974 nt3.96□□□□□ -1.78
SSL2Q00578 SMC3YJL074C 3693 nt3.96□□□□□ -1.78
SSL2Q00578 CIT1YNR001C 1440 nt3.95□□□□□ -1.78
SSL2Q00578 NEL1YHR035W 1893 nt3.95□□□□□ -1.78
SSL2Q00578 ATG21YPL100W 1491 nt3.95□□□□□ -1.78
SSL2Q00578 HUR1YGL168W 333 nt3.95□□□□□ -1.78
SSL2Q00578 YET1YKL065C 621 nt3.95□□□□□ -1.78
SSL2Q00578 UTP11YKL099C 753 nt3.95□□□□□ -1.78
SSL2Q00578 YML084WYML084W 309 nt3.95□□□□□ -1.78
SSL2Q00578 YNR021WYNR021W 1215 nt3.95□□□□□ -1.78
SSL2Q00578 YNR034W-AYNR034W-A 297 nt3.95□□□□□ -1.78
SSL2Q00578 LDS2YOL047C 1071 nt3.95□□□□□ -1.78
SSL2Q00578 snR41snR41 95 nt3.95□□□□□ -1.78
SSL2Q00578 YKL050CYKL050C 2769 nt3.95□□□□□ -1.78
SSL2Q00578 RAD26YJR035W 3258 nt3.94□□□□□ -1.78
SSL2Q00578 PKH1YDR490C 2301 nt3.94□□□□□ -1.78
SSL2Q00578 SLY41YOR307C 1362 nt3.94□□□□□ -1.78
SSL2Q00578 YPD1YDL235C 504 nt3.94□□□□□ -1.78
SSL2Q00578 YER079WYER079W 633 nt3.94□□□□□ -1.78
SSL2Q00578 SEC4YFL005W 648 nt3.94□□□□□ -1.78
SSL2Q00578 TPM2YIL138C 486 nt3.94□□□□□ -1.78
SSL2Q00578 YKL065W-AYKL065W-A 222 nt3.94□□□□□ -1.78
SSL2Q00578 VPH2YKL119C 648 nt3.94□□□□□ -1.78
SSL2Q00578 ATG10YLL042C 504 nt3.94□□□□□ -1.78
SSL2Q00578 RNP1YLL046C 750 nt3.94□□□□□ -1.78
SSL2Q00578 BER1YLR412W 825 nt3.94□□□□□ -1.78
SSL2Q00578 ATP18YML081C-A 180 nt3.94□□□□□ -1.78
SSL2Q00578 YMR173W-AYMR173W-A 1185 nt3.94□□□□□ -1.78
SSL2Q00578 YPL088WYPL088W 1029 nt3.94□□□□□ -1.78
SSL2Q00578 YDR269CYDR269C 324 nt3.93□□□□□ -1.78
SSL2Q00578 RPL9AYGL147C 576 nt3.93□□□□□ -1.78
SSL2Q00578 YHR182C-AYHR182C-A 474 nt3.93□□□□□ -1.78
SSL2Q00578 RAD33YML011C 534 nt3.93□□□□□ -1.78
SSL2Q00578 VPS33YLR396C 2076 nt3.93□□□□□ -1.78
SSL2Q00578 KIN3YAR018C 1308 nt3.93□□□□□ -1.78
SSL2Q00578 UBP16YPL072W 1500 nt3.92□□□□□ -1.78
SSL2Q00578 ATG31YDR022C 591 nt3.92□□□□□ -1.78
SSL2Q00578 FMP10YER182W 735 nt3.92□□□□□ -1.78
SSL2Q00578 SUS1YBR111W-A 291 nt3.92□□□□□ -1.78
SSL2Q00578 APD1YBR151W 951 nt3.92□□□□□ -1.78
SSL2Q00578 SEC66YBR171W 621 nt3.92□□□□□ -1.78
SSL2Q00578 TMA108YIL137C 2841 nt3.92□□□□□ -1.78
SSL2Q00578 RPS18AYDR450W 441 nt3.91□□□□□ -1.78
SSL2Q00578 FAR7YFR008W 666 nt3.91□□□□□ -1.78
SSL2Q00578 YGR039WYGR039W 312 nt3.91□□□□□ -1.78
SSL2Q00578 YGR228WYGR228W 345 nt3.91□□□□□ -1.78
SSL2Q00578 YHR130CYHR130C 336 nt3.91□□□□□ -1.78
SSL2Q00578 YHR138CYHR138C 345 nt3.91□□□□□ -1.78
SSL2Q00578 YIR014WYIR014W 729 nt3.91□□□□□ -1.78
SSL2Q00578 ANB1YJR047C 474 nt3.91□□□□□ -1.78
SSL2Q00578 COX19YLL018C-A 297 nt3.91□□□□□ -1.78
SSL2Q00578 RPA14YDR156W 414 nt3.9□□□□□ -1.79
SSL2Q00578 BNA7YDR428C 786 nt3.9□□□□□ -1.79
SSL2Q00578 YER119C-AYER119C-A 372 nt3.9□□□□□ -1.79
SSL2Q00578 SAE2YGL175C 1038 nt3.9□□□□□ -1.79
SSL2Q00578 GOS1YHL031C 672 nt3.9□□□□□ -1.79
SSL2Q00578 YKL070WYKL070W 510 nt3.9□□□□□ -1.79
SSL2Q00578 YLL044WYLL044W 447 nt3.9□□□□□ -1.79
SSL2Q00578 SEC22YLR268W 645 nt3.9□□□□□ -1.79
SSL2Q00578 RNR1YER070W 2667 nt3.9□□□□□ -1.79
SSL2Q00578 VHR1YIL056W 1923 nt3.89□□□□□ -1.79
SSL2Q00578 BMS1YPL217C 3552 nt3.89□□□□□ -1.79
SSL2Q00578 YER087C-AYER087C-A 552 nt3.89□□□□□ -1.79
SSL2Q00578 GET1YGL020C 708 nt3.89□□□□□ -1.79
SSL2Q00578 YML099W-AYML099W-A 330 nt3.89□□□□□ -1.79
SSL2Q00578 RAD14YMR201C 1116 nt3.89□□□□□ -1.79
SSL2Q00578 YPR108W-AYPR108W-A 213 nt3.89□□□□□ -1.79
SSL2Q00578 KRE5YOR336W 4098 nt3.89□□□□□ -1.79
SSL2Q00578 YBP2YGL060W 1926 nt3.89□□□□□ -1.79
SSL2Q00578 YPR148CYPR148C 1308 nt3.89□□□□□ -1.79
SSL2Q00578 TAF6YGL112C 1551 nt3.89□□□□□ -1.79
SSL2Q00578 GYP6YJL044C 1377 nt3.89□□□□□ -1.79
SSL2Q00578 PES4YFR023W 1836 nt3.88□□□□□ -1.79
SSL2Q00578 DAN4YJR151C 3486 nt3.88□□□□□ -1.79
SSL2Q00578 YER175W-AYER175W-A 165 nt3.88□□□□□ -1.79
SSL2Q00578 MAK16YAL025C 921 nt3.88□□□□□ -1.79
SSL2Q00578 ACF4YJR083C 930 nt3.88□□□□□ -1.79
SSL2Q00578 SIL1YOL031C 1266 nt3.88□□□□□ -1.79
SSL2Q00578 NGL1YOL042W 1092 nt3.88□□□□□ -1.79
SSL2Q00578 TIR2YOR010C 756 nt3.88□□□□□ -1.79
SSL2Q00578 GPX2YBR244W 489 nt3.88□□□□□ -1.79
SSL2Q00578 DIT2YDR402C 1470 nt3.87□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms