Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YBR137WYBR137W 540 nt3.53□□□□□ -1.84
SUB1P54000 BRE5YNR051C 1548 nt3.53□□□□□ -1.84
SUB1P54000 ATC1YDR184C 885 nt3.52□□□□□ -1.85
SUB1P54000 YGR017WYGR017W 894 nt3.52□□□□□ -1.85
SUB1P54000 THP2YHR167W 786 nt3.52□□□□□ -1.85
SUB1P54000 CTK2YJL006C 972 nt3.52□□□□□ -1.85
SUB1P54000 PIR1YKL164C 1026 nt3.52□□□□□ -1.85
SUB1P54000 SFH1YLR321C 1281 nt3.52□□□□□ -1.85
SUB1P54000 YPR203WYPR203W 309 nt3.52□□□□□ -1.85
SUB1P54000 VHR1YIL056W 1923 nt3.52□□□□□ -1.85
SUB1P54000 FIR1YER032W 2631 nt3.52□□□□□ -1.85
SUB1P54000 PDR12YPL058C 4536 nt3.52□□□□□ -1.85
SUB1P54000 PRP8YHR165C 7242 nt3.52□□□□□ -1.85
SUB1P54000 YCR075W-AYCR075W-A 228 nt3.51□□□□□ -1.85
SUB1P54000 YER046W-AYER046W-A 330 nt3.51□□□□□ -1.85
SUB1P54000 TMA19YKL056C 504 nt3.51□□□□□ -1.85
SUB1P54000 YKE2YLR200W 345 nt3.51□□□□□ -1.85
SUB1P54000 RPS30AYLR287C-A 192 nt3.51□□□□□ -1.85
SUB1P54000 YLR365WYLR365W 333 nt3.51□□□□□ -1.85
SUB1P54000 STT4YLR305C 5703 nt3.51□□□□□ -1.85
SUB1P54000 JSN1YJR091C 3276 nt3.51□□□□□ -1.85
SUB1P54000 LTV1YKL143W 1392 nt3.51□□□□□ -1.85
SUB1P54000 STU2YLR045C 2667 nt3.5□□□□□ -1.85
SUB1P54000 DUG2YBR281C 2637 nt3.5□□□□□ -1.85
SUB1P54000 NUR1YDL089W 1455 nt3.5□□□□□ -1.85
SUB1P54000 RPL8BYLL045C 771 nt3.5□□□□□ -1.85
SUB1P54000 YNL320WYNL320W 855 nt3.5□□□□□ -1.85
SUB1P54000 YOL106WYOL106W 354 nt3.5□□□□□ -1.85
SUB1P54000 snR24snR24 89 nt3.5□□□□□ -1.85
SUB1P54000 SLS1YLR139C 1932 nt3.5□□□□□ -1.85
SUB1P54000 ASI3YNL008C 2031 nt3.49□□□□□ -1.85
SUB1P54000 NUP60YAR002W 1620 nt3.49□□□□□ -1.85
SUB1P54000 HTB1YDR224C 396 nt3.49□□□□□ -1.85
SUB1P54000 ATG10YLL042C 504 nt3.49□□□□□ -1.85
SUB1P54000 MAL33YBR297W 1407 nt3.49□□□□□ -1.85
SUB1P54000 YGL176CYGL176C 1665 nt3.49□□□□□ -1.85
SUB1P54000 VTC4YJL012C 2166 nt3.48□□□□□ -1.85
SUB1P54000 AUS1YOR011W 4185 nt3.48□□□□□ -1.85
SUB1P54000 POL2YNL262W 6669 nt3.48□□□□□ -1.85
SUB1P54000 RPL30YGL030W 318 nt3.48□□□□□ -1.85
SUB1P54000 YLR050CYLR050C 486 nt3.48□□□□□ -1.85
SUB1P54000 RPL16BYNL069C 597 nt3.48□□□□□ -1.85
SUB1P54000 YNR042WYNR042W 429 nt3.48□□□□□ -1.85
SUB1P54000 PET20YPL159C 762 nt3.48□□□□□ -1.85
SUB1P54000 snR191snR191 274 nt3.48□□□□□ -1.85
SUB1P54000 NTC20YBR188C 423 nt3.48□□□□□ -1.85
SUB1P54000 ARO1YDR127W 4767 nt3.48□□□□□ -1.85
SUB1P54000 SLF1YDR515W 1344 nt3.47□□□□□ -1.85
SUB1P54000 VPS33YLR396C 2076 nt3.47□□□□□ -1.85
SUB1P54000 CST9YLR394W 1449 nt3.47□□□□□ -1.85
SUB1P54000 YIL012WYIL012W 342 nt3.47□□□□□ -1.85
SUB1P54000 YIL068W-AYIL068W-A 384 nt3.47□□□□□ -1.85
SUB1P54000 POL32YJR043C 1053 nt3.47□□□□□ -1.85
SUB1P54000 GPX1YKL026C 504 nt3.47□□□□□ -1.85
SUB1P54000 FLD1YLR404W 858 nt3.47□□□□□ -1.85
SUB1P54000 ATX1YNL259C 222 nt3.47□□□□□ -1.85
SUB1P54000 SRB4YER022W 2064 nt3.47□□□□□ -1.85
SUB1P54000 YIL080WYIL080W 4722 nt3.46□□□□□ -1.85
SUB1P54000 NGG1YDR176W 2109 nt3.46□□□□□ -1.86
SUB1P54000 MRH1YDR033W 963 nt3.46□□□□□ -1.86
SUB1P54000 YHL002C-AYHL002C-A 489 nt3.46□□□□□ -1.86
SUB1P54000 tX(XXX)DtX(XXX)D 100 nt3.46□□□□□ -1.86
SUB1P54000 RPL17BYJL177W 555 nt3.46□□□□□ -1.86
SUB1P54000 YPL107WYPL107W 747 nt3.46□□□□□ -1.86
SUB1P54000 NFT1YKR103W 3657 nt3.46□□□□□ -1.86
SUB1P54000 RTG3YBL103C 1461 nt3.46□□□□□ -1.86
SUB1P54000 TGL3YMR313C 1929 nt3.46□□□□□ -1.86
SUB1P54000 ANR2YKL047W 1551 nt3.46□□□□□ -1.86
SUB1P54000 MRH4YGL064C 1686 nt3.46□□□□□ -1.86
SUB1P54000 DRS2YAL026C 4068 nt3.45□□□□□ -1.86
SUB1P54000 FUS2YMR232W 2034 nt3.45□□□□□ -1.86
SUB1P54000 NOP19YGR251W 591 nt3.45□□□□□ -1.86
SUB1P54000 COX19YLL018C-A 297 nt3.45□□□□□ -1.86
SUB1P54000 SMD3YLR147C 306 nt3.45□□□□□ -1.86
SUB1P54000 GCN1YGL195W 8019 nt3.45□□□□□ -1.86
SUB1P54000 SLP1YOR154W 1764 nt3.45□□□□□ -1.86
SUB1P54000 SLK19YOR195W 2466 nt3.45□□□□□ -1.86
SUB1P54000 PCI8YIL071C 1335 nt3.44□□□□□ -1.86
SUB1P54000 AGE1YDR524C 1449 nt3.44□□□□□ -1.86
SUB1P54000 RIM13YMR154C 2184 nt3.44□□□□□ -1.86
SUB1P54000 ARP4YJL081C 1470 nt3.44□□□□□ -1.86
SUB1P54000 YDR381C-AYDR381C-A 345 nt3.44□□□□□ -1.86
SUB1P54000 VMA7YGR020C 357 nt3.44□□□□□ -1.86
SUB1P54000 YHR214C-DYHR214C-D 294 nt3.44□□□□□ -1.86
SUB1P54000 YAR069CYAR069C 294 nt3.44□□□□□ -1.86
SUB1P54000 MRPL33YMR286W 261 nt3.44□□□□□ -1.86
SUB1P54000 PEX27YOR193W 1131 nt3.44□□□□□ -1.86
SUB1P54000 AFT2YPL202C 1251 nt3.44□□□□□ -1.86
SUB1P54000 NPR3YHL023C 3441 nt3.44□□□□□ -1.86
SUB1P54000 ATG26YLR189C 3597 nt3.44□□□□□ -1.86
SUB1P54000 APC2YLR127C 2562 nt3.44□□□□□ -1.86
SUB1P54000 CHO2YGR157W 2610 nt3.43□□□□□ -1.86
SUB1P54000 ADY4YLR227C 1482 nt3.43□□□□□ -1.86
SUB1P54000 MET10YFR030W 3108 nt3.43□□□□□ -1.86
SUB1P54000 NSA1YGL111W 1392 nt3.43□□□□□ -1.86
SUB1P54000 YMR31YFR049W 372 nt3.43□□□□□ -1.86
SUB1P54000 COX6YHR051W 447 nt3.43□□□□□ -1.86
SUB1P54000 RPL17AYKL180W 555 nt3.43□□□□□ -1.86
SUB1P54000 YMR010WYMR010W 1218 nt3.43□□□□□ -1.86
SUB1P54000 HUA2YOR284W 732 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 697.8 ms