Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 NSA1YGL111W 1392 nt2.48□□□□□ -2.01
UFD1P53044 MYO5YMR109W 3660 nt2.47□□□□□ -2.01
UFD1P53044 YIL169CYIL169C 2988 nt2.47□□□□□ -2.01
UFD1P53044 SPP382YLR424W 2127 nt2.47□□□□□ -2.01
UFD1P53044 YDL032WYDL032W 312 nt2.47□□□□□ -2.01
UFD1P53044 DPP1YDR284C 870 nt2.47□□□□□ -2.01
UFD1P53044 HYP2YEL034W 474 nt2.47□□□□□ -2.01
UFD1P53044 YKL131WYKL131W 522 nt2.47□□□□□ -2.01
UFD1P53044 SDO1YLR022C 753 nt2.47□□□□□ -2.01
UFD1P53044 GPN3YLR243W 819 nt2.47□□□□□ -2.01
UFD1P53044 YLR365WYLR365W 333 nt2.47□□□□□ -2.01
UFD1P53044 TEM1YML064C 738 nt2.47□□□□□ -2.01
UFD1P53044 ERV41YML067C 1059 nt2.47□□□□□ -2.01
UFD1P53044 SRT1YMR101C 1032 nt2.47□□□□□ -2.01
UFD1P53044 DLT1YMR126C 1029 nt2.47□□□□□ -2.01
UFD1P53044 MCA1YOR197W 1299 nt2.47□□□□□ -2.01
UFD1P53044 TYE7YOR344C 876 nt2.47□□□□□ -2.01
UFD1P53044 YPR050CYPR050C 414 nt2.47□□□□□ -2.01
UFD1P53044 TOM70YNL121C 1854 nt2.46□□□□□ -2.02
UFD1P53044 SKP2YNL311C 2292 nt2.46□□□□□ -2.02
UFD1P53044 YDR491CYDR491C 492 nt2.46□□□□□ -2.02
UFD1P53044 UPF3YGR072W 1164 nt2.46□□□□□ -2.02
UFD1P53044 ATG27YJL178C 816 nt2.46□□□□□ -2.02
UFD1P53044 TDA8YAL064C-A 381 nt2.46□□□□□ -2.02
UFD1P53044 SMD3YLR147C 306 nt2.46□□□□□ -2.02
UFD1P53044 RNH203YLR154C 333 nt2.46□□□□□ -2.02
UFD1P53044 NDL1YLR254C 570 nt2.46□□□□□ -2.02
UFD1P53044 SMA2YML066C 1110 nt2.46□□□□□ -2.02
UFD1P53044 RSM19YNR037C 276 nt2.46□□□□□ -2.02
UFD1P53044 APD1YBR151W 951 nt2.46□□□□□ -2.02
UFD1P53044 MET5YJR137C 4329 nt2.46□□□□□ -2.02
UFD1P53044 GYP7YDL234C 2241 nt2.46□□□□□ -2.02
UFD1P53044 YBL005W-BYBL005W-B 5268 nt2.46□□□□□ -2.02
UFD1P53044 APC5YOR249C 2058 nt2.46□□□□□ -2.02
UFD1P53044 MSH2YOL090W 2895 nt2.46□□□□□ -2.02
UFD1P53044 ENP2YGR145W 2124 nt2.45□□□□□ -2.02
UFD1P53044 YME2YMR302C 2553 nt2.45□□□□□ -2.02
UFD1P53044 YDR320W-BYDR320W-B 138 nt2.45□□□□□ -2.02
UFD1P53044 MFA1YDR461W 111 nt2.45□□□□□ -2.02
UFD1P53044 YGR073CYGR073C 372 nt2.45□□□□□ -2.02
UFD1P53044 RPL24BYGR148C 468 nt2.45□□□□□ -2.02
UFD1P53044 RPL17BYJL177W 555 nt2.45□□□□□ -2.02
UFD1P53044 ENV10YLR065C 546 nt2.45□□□□□ -2.02
UFD1P53044 YMR158C-AYMR158C-A 138 nt2.45□□□□□ -2.02
UFD1P53044 MIC27YNL100W 705 nt2.45□□□□□ -2.02
UFD1P53044 MPP6YNR024W 561 nt2.45□□□□□ -2.02
UFD1P53044 SRL1YOR247W 633 nt2.45□□□□□ -2.02
UFD1P53044 MPS1YDL028C 2295 nt2.45□□□□□ -2.02
UFD1P53044 SPT14YPL175W 1359 nt2.45□□□□□ -2.02
UFD1P53044 YLR001CYLR001C 2589 nt2.45□□□□□ -2.02
UFD1P53044 GEP7YGL057C 864 nt2.44□□□□□ -2.02
UFD1P53044 tR(UCU)Q1tR(UCU)Q1 73 nt2.44□□□□□ -2.02
UFD1P53044 YIL174WYIL174W 228 nt2.44□□□□□ -2.02
UFD1P53044 SYS1YJL004C 612 nt2.44□□□□□ -2.02
UFD1P53044 MBB1YJL199C 327 nt2.44□□□□□ -2.02
UFD1P53044 YJL222W-AYJL222W-A 228 nt2.44□□□□□ -2.02
UFD1P53044 YKR011CYKR011C 1062 nt2.44□□□□□ -2.02
UFD1P53044 COA4YLR218C 453 nt2.44□□□□□ -2.02
UFD1P53044 TSR4YOL022C 1227 nt2.44□□□□□ -2.02
UFD1P53044 UTP14YML093W 2700 nt2.44□□□□□ -2.02
UFD1P53044 JIP5YPR169W 1479 nt2.44□□□□□ -2.02
UFD1P53044 YCG1YDR325W 3108 nt2.44□□□□□ -2.02
UFD1P53044 VIP1YLR410W 3441 nt2.43□□□□□ -2.02
UFD1P53044 REG1YDR028C 3045 nt2.43□□□□□ -2.02
UFD1P53044 RUB1YDR139C 234 nt2.43□□□□□ -2.02
UFD1P53044 MAM1YER106W 909 nt2.43□□□□□ -2.02
UFD1P53044 RPL23BYER117W 414 nt2.43□□□□□ -2.02
UFD1P53044 PEF1YGR058W 1008 nt2.43□□□□□ -2.02
UFD1P53044 ERG25YGR060W 930 nt2.43□□□□□ -2.02
UFD1P53044 SVP26YHR181W 687 nt2.43□□□□□ -2.02
UFD1P53044 RFA3YJL173C 369 nt2.43□□□□□ -2.02
UFD1P53044 YKR033CYKR033C 426 nt2.43□□□□□ -2.02
UFD1P53044 YAL064WYAL064W 285 nt2.43□□□□□ -2.02
UFD1P53044 RPL20AYMR242C 519 nt2.43□□□□□ -2.02
UFD1P53044 MRPL17YNL252C 846 nt2.43□□□□□ -2.02
UFD1P53044 INO4YOL108C 456 nt2.43□□□□□ -2.02
UFD1P53044 PFY1YOR122C 381 nt2.43□□□□□ -2.02
UFD1P53044 RPS12YOR369C 432 nt2.43□□□□□ -2.02
UFD1P53044 YPL135C-AYPL135C-A 174 nt2.43□□□□□ -2.02
UFD1P53044 RPL33AYPL143W 324 nt2.43□□□□□ -2.02
UFD1P53044 YBR201C-AYBR201C-A 204 nt2.43□□□□□ -2.02
UFD1P53044 PSK1YAL017W 4071 nt2.43□□□□□ -2.02
UFD1P53044 IKI3YLR384C 4050 nt2.43□□□□□ -2.02
UFD1P53044 NUM1YDR150W 8247 nt2.43□□□□□ -2.02
UFD1P53044 MET6YER091C 2304 nt2.42□□□□□ -2.02
UFD1P53044 VPS3YDR495C 3036 nt2.42□□□□□ -2.02
UFD1P53044 MUS81YDR386W 1899 nt2.42□□□□□ -2.02
UFD1P53044 TPO5YKL174C 1857 nt2.42□□□□□ -2.02
UFD1P53044 CIK1YMR198W 1785 nt2.42□□□□□ -2.02
UFD1P53044 YCR100CYCR100C 951 nt2.42□□□□□ -2.02
UFD1P53044 FMN1YDR236C 657 nt2.42□□□□□ -2.02
UFD1P53044 RTT105YER104W 627 nt2.42□□□□□ -2.02
UFD1P53044 SEC4YFL005W 648 nt2.42□□□□□ -2.02
UFD1P53044 YGR017WYGR017W 894 nt2.42□□□□□ -2.02
UFD1P53044 RPS22AYJL190C 393 nt2.42□□□□□ -2.02
UFD1P53044 SPC2YML055W 537 nt2.42□□□□□ -2.02
UFD1P53044 ACM1YPL267W 630 nt2.42□□□□□ -2.02
UFD1P53044 SGM1YJR134C 2124 nt2.42□□□□□ -2.02
UFD1P53044 YLR446WYLR446W 1302 nt2.42□□□□□ -2.02
UFD1P53044 TOR1YJR066W 7413 nt2.41□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 62.4 ms