Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 EBS1YDR206W 2655 nt3.51□□□□□ -1.85
RPN11P43588 YDR170W-AYDR170W-A 1323 nt3.5□□□□□ -1.85
RPN11P43588 YMR046CYMR046C 1323 nt3.5□□□□□ -1.85
RPN11P43588 YIL169CYIL169C 2988 nt3.5□□□□□ -1.85
RPN11P43588 ARP4YJL081C 1470 nt3.5□□□□□ -1.85
RPN11P43588 SIN4YNL236W 2925 nt3.5□□□□□ -1.85
RPN11P43588 YDR381C-AYDR381C-A 345 nt3.5□□□□□ -1.85
RPN11P43588 TAM41YGR046W 1158 nt3.5□□□□□ -1.85
RPN11P43588 YHL048C-AYHL048C-A 135 nt3.5□□□□□ -1.85
RPN11P43588 COX2Q0250 756 nt3.5□□□□□ -1.85
RPN11P43588 POG1YIL122W 1056 nt3.5□□□□□ -1.85
RPN11P43588 YJL133C-AYJL133C-A 225 nt3.5□□□□□ -1.85
RPN11P43588 ATG27YJL178C 816 nt3.5□□□□□ -1.85
RPN11P43588 SOP4YJL192C 705 nt3.5□□□□□ -1.85
RPN11P43588 ERP1YAR002C-A 660 nt3.5□□□□□ -1.85
RPN11P43588 CIK1YMR198W 1785 nt3.5□□□□□ -1.85
RPN11P43588 FLO10YKR102W 3510 nt3.5□□□□□ -1.85
RPN11P43588 YIL082W-AYIL082W-A 4497 nt3.5□□□□□ -1.85
RPN11P43588 RIF1YBR275C 5751 nt3.49□□□□□ -1.85
RPN11P43588 SPT23YKL020C 3249 nt3.49□□□□□ -1.85
RPN11P43588 YHR078WYHR078W 1659 nt3.49□□□□□ -1.85
RPN11P43588 XRS2YDR369C 2565 nt3.49□□□□□ -1.85
RPN11P43588 YDR029WYDR029W 315 nt3.49□□□□□ -1.85
RPN11P43588 MFA1YDR461W 111 nt3.49□□□□□ -1.85
RPN11P43588 COBQ0105 1158 nt3.49□□□□□ -1.85
RPN11P43588 PEX18YHR160C 852 nt3.49□□□□□ -1.85
RPN11P43588 DAL2YIR029W 1032 nt3.49□□□□□ -1.85
RPN11P43588 YAL037WYAL037W 804 nt3.49□□□□□ -1.85
RPN11P43588 TPK3YKL166C 1197 nt3.49□□□□□ -1.85
RPN11P43588 FAR3YMR052W 615 nt3.49□□□□□ -1.85
RPN11P43588 RXT2YBR095C 1293 nt3.49□□□□□ -1.85
RPN11P43588 FRE4YNR060W 2160 nt3.49□□□□□ -1.85
RPN11P43588 YRM1YOR172W 2361 nt3.48□□□□□ -1.85
RPN11P43588 VPS33YLR396C 2076 nt3.48□□□□□ -1.85
RPN11P43588 YBP2YGL060W 1926 nt3.48□□□□□ -1.85
RPN11P43588 SLF1YDR515W 1344 nt3.48□□□□□ -1.85
RPN11P43588 MCD4YKL165C 2760 nt3.48□□□□□ -1.85
RPN11P43588 KIP3YGL216W 2418 nt3.48□□□□□ -1.85
RPN11P43588 ERB1YMR049C 2424 nt3.48□□□□□ -1.85
RPN11P43588 MST27YGL051W 705 nt3.48□□□□□ -1.85
RPN11P43588 EMC4YGL231C 573 nt3.48□□□□□ -1.85
RPN11P43588 YJL114WYJL114W 681 nt3.48□□□□□ -1.85
RPN11P43588 SDS22YKL193C 1017 nt3.48□□□□□ -1.85
RPN11P43588 MST28YAR033W 705 nt3.48□□□□□ -1.85
RPN11P43588 ICY1YMR195W 384 nt3.48□□□□□ -1.85
RPN11P43588 YNL276CYNL276C 396 nt3.48□□□□□ -1.85
RPN11P43588 YNR062CYNR062C 984 nt3.48□□□□□ -1.85
RPN11P43588 SRP1YNL189W 1629 nt3.48□□□□□ -1.85
RPN11P43588 TMA108YIL137C 2841 nt3.48□□□□□ -1.85
RPN11P43588 YPL216WYPL216W 3309 nt3.47□□□□□ -1.85
RPN11P43588 SPT16YGL207W 3108 nt3.47□□□□□ -1.85
RPN11P43588 VPS17YOR132W 1656 nt3.47□□□□□ -1.85
RPN11P43588 FAP7YDL166C 594 nt3.47□□□□□ -1.85
RPN11P43588 RAV2YDR202C 1056 nt3.47□□□□□ -1.85
RPN11P43588 KEI1YDR367W 666 nt3.47□□□□□ -1.85
RPN11P43588 AST2YER101C 1293 nt3.47□□□□□ -1.85
RPN11P43588 MND1YGL183C 660 nt3.47□□□□□ -1.85
RPN11P43588 UPF3YGR072W 1164 nt3.47□□□□□ -1.85
RPN11P43588 IST3YIR005W 447 nt3.47□□□□□ -1.85
RPN11P43588 PRP21YJL203W 843 nt3.47□□□□□ -1.85
RPN11P43588 ANB1YJR047C 474 nt3.47□□□□□ -1.85
RPN11P43588 YLL044WYLL044W 447 nt3.47□□□□□ -1.85
RPN11P43588 IRC21YMR073C 606 nt3.47□□□□□ -1.85
RPN11P43588 YMR254CYMR254C 309 nt3.47□□□□□ -1.85
RPN11P43588 FYV5YCL058C 459 nt3.47□□□□□ -1.85
RPN11P43588 SPA2YLL021W 4401 nt3.47□□□□□ -1.85
RPN11P43588 STU1YBL034C 4542 nt3.47□□□□□ -1.85
RPN11P43588 AEP1YMR064W 1557 nt3.46□□□□□ -1.85
RPN11P43588 MIP6YHR015W 1980 nt3.46□□□□□ -1.86
RPN11P43588 NSE4YDL105W 1209 nt3.46□□□□□ -1.86
RPN11P43588 CLB3YDL155W 1284 nt3.46□□□□□ -1.86
RPN11P43588 YFL015CYFL015C 495 nt3.46□□□□□ -1.86
RPN11P43588 TAD1YGL243W 1203 nt3.46□□□□□ -1.86
RPN11P43588 YKL115CYKL115C 393 nt3.46□□□□□ -1.86
RPN11P43588 YKR011CYKR011C 1062 nt3.46□□□□□ -1.86
RPN11P43588 MCA1YOR197W 1299 nt3.46□□□□□ -1.86
RPN11P43588 MUD1YBR119W 897 nt3.46□□□□□ -1.86
RPN11P43588 SPO14YKR031C 5052 nt3.46□□□□□ -1.86
RPN11P43588 STP1YDR463W 1560 nt3.46□□□□□ -1.86
RPN11P43588 TRM82YDR165W 1335 nt3.45□□□□□ -1.86
RPN11P43588 ARP5YNL059C 2268 nt3.45□□□□□ -1.86
RPN11P43588 KRE5YOR336W 4098 nt3.45□□□□□ -1.86
RPN11P43588 DSE2YHR143W 978 nt3.45□□□□□ -1.86
RPN11P43588 YKL070WYKL070W 510 nt3.45□□□□□ -1.86
RPN11P43588 YBL028CYBL028C 321 nt3.45□□□□□ -1.86
RPN11P43588 YMR294W-AYMR294W-A 360 nt3.45□□□□□ -1.86
RPN11P43588 YBR141W-AYBR141W-A 96 nt3.45□□□□□ -1.86
RPN11P43588 ADF1YCL058W-A 342 nt3.45□□□□□ -1.86
RPN11P43588 POL2YNL262W 6669 nt3.45□□□□□ -1.86
RPN11P43588 ERG9YHR190W 1335 nt3.44□□□□□ -1.86
RPN11P43588 ATG11YPR049C 3537 nt3.44□□□□□ -1.86
RPN11P43588 EMC1YCL045C 2283 nt3.44□□□□□ -1.86
RPN11P43588 TPO5YKL174C 1857 nt3.44□□□□□ -1.86
RPN11P43588 UBX3YDL091C 1368 nt3.44□□□□□ -1.86
RPN11P43588 BRR6YGL247W 594 nt3.44□□□□□ -1.86
RPN11P43588 GIM5YML094W 492 nt3.44□□□□□ -1.86
RPN11P43588 YMR187CYMR187C 1296 nt3.44□□□□□ -1.86
RPN11P43588 AAR2YBL074C 1068 nt3.44□□□□□ -1.86
RPN11P43588 SEC6YIL068C 2418 nt3.44□□□□□ -1.86
RPN11P43588 NMA111YNL123W 2994 nt3.44□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms