Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 YAR062WYAR062W 597 nt2.35□□□□□ -2.03
CUE1P38428 COX14YML129C 213 nt2.35□□□□□ -2.03
CUE1P38428 URB2YJR041C 3525 nt2.35□□□□□ -2.03
CUE1P38428 ATP22YDR350C 2055 nt2.35□□□□□ -2.03
CUE1P38428 SSN2YDR443C 4263 nt2.34□□□□□ -2.03
CUE1P38428 FIR1YER032W 2631 nt2.34□□□□□ -2.03
CUE1P38428 KHA1YJL094C 2622 nt2.34□□□□□ -2.03
CUE1P38428 DUG2YBR281C 2637 nt2.34□□□□□ -2.03
CUE1P38428 TIM11YDR322C-A 291 nt2.34□□□□□ -2.03
CUE1P38428 YGR018CYGR018C 330 nt2.34□□□□□ -2.03
CUE1P38428 ERV1YGR029W 570 nt2.34□□□□□ -2.03
CUE1P38428 PEF1YGR058W 1008 nt2.34□□□□□ -2.03
CUE1P38428 YJR071WYJR071W 369 nt2.34□□□□□ -2.03
CUE1P38428 ADI1YMR009W 540 nt2.34□□□□□ -2.03
CUE1P38428 TSR4YOL022C 1227 nt2.34□□□□□ -2.03
CUE1P38428 RPS12YOR369C 432 nt2.34□□□□□ -2.03
CUE1P38428 RRD2YPL152W 1077 nt2.34□□□□□ -2.03
CUE1P38428 ERV15YBR210W 429 nt2.34□□□□□ -2.03
CUE1P38428 AI2Q0055 2565 nt2.34□□□□□ -2.04
CUE1P38428 ORC1YML065W 2745 nt2.33□□□□□ -2.04
CUE1P38428 AI3Q0060 1248 nt2.33□□□□□ -2.04
CUE1P38428 FMN1YDR236C 657 nt2.33□□□□□ -2.04
CUE1P38428 YIL102C-AYIL102C-A 228 nt2.33□□□□□ -2.04
CUE1P38428 SAW1YAL027W 786 nt2.33□□□□□ -2.04
CUE1P38428 YKL033W-AYKL033W-A 711 nt2.33□□□□□ -2.04
CUE1P38428 YNL171CYNL171C 369 nt2.33□□□□□ -2.04
CUE1P38428 PBP2YBR233W 1242 nt2.33□□□□□ -2.04
CUE1P38428 YNL193WYNL193W 1677 nt2.33□□□□□ -2.04
CUE1P38428 MUB1YMR100W 1863 nt2.33□□□□□ -2.04
CUE1P38428 UBP15YMR304W 3693 nt2.32□□□□□ -2.04
CUE1P38428 YDR131CYDR131C 1671 nt2.32□□□□□ -2.04
CUE1P38428 IMP3YHR148W 552 nt2.32□□□□□ -2.04
CUE1P38428 YIL174WYIL174W 228 nt2.32□□□□□ -2.04
CUE1P38428 YIR036W-AYIR036W-A 402 nt2.32□□□□□ -2.04
CUE1P38428 YJL222W-AYJL222W-A 228 nt2.32□□□□□ -2.04
CUE1P38428 RPL6BYLR448W 531 nt2.32□□□□□ -2.04
CUE1P38428 SUT2YPR009W 807 nt2.32□□□□□ -2.04
CUE1P38428 ARP9YMR033W 1404 nt2.32□□□□□ -2.04
CUE1P38428 ISW1YBR245C 3390 nt2.32□□□□□ -2.04
CUE1P38428 MAK5YBR142W 2322 nt2.31□□□□□ -2.04
CUE1P38428 RLI1YDR091C 1827 nt2.31□□□□□ -2.04
CUE1P38428 snR68snR68 136 nt2.31□□□□□ -2.04
CUE1P38428 RPL13AYDL082W 600 nt2.31□□□□□ -2.04
CUE1P38428 RPS22AYJL190C 393 nt2.31□□□□□ -2.04
CUE1P38428 JIP3YLR331C 378 nt2.31□□□□□ -2.04
CUE1P38428 PSY3YLR376C 729 nt2.31□□□□□ -2.04
CUE1P38428 RPS1AYLR441C 768 nt2.31□□□□□ -2.04
CUE1P38428 GCY1YOR120W 939 nt2.31□□□□□ -2.04
CUE1P38428 RPL33AYPL143W 324 nt2.31□□□□□ -2.04
CUE1P38428 VAC14YLR386W 2643 nt2.31□□□□□ -2.04
CUE1P38428 YDR061WYDR061W 1620 nt2.31□□□□□ -2.04
CUE1P38428 YDR098C-BYDR098C-B 5268 nt2.31□□□□□ -2.04
CUE1P38428 YDR210C-DYDR210C-D 5268 nt2.31□□□□□ -2.04
CUE1P38428 YDR316W-BYDR316W-B 5268 nt2.31□□□□□ -2.04
CUE1P38428 YDR365W-BYDR365W-B 5268 nt2.31□□□□□ -2.04
CUE1P38428 YER138CYER138C 5268 nt2.31□□□□□ -2.04
CUE1P38428 YER160CYER160C 5268 nt2.31□□□□□ -2.04
CUE1P38428 YGR038C-BYGR038C-B 5268 nt2.31□□□□□ -2.04
CUE1P38428 YGR161C-DYGR161C-D 5268 nt2.31□□□□□ -2.04
CUE1P38428 YJR027WYJR027W 5268 nt2.31□□□□□ -2.04
CUE1P38428 YLR157C-BYLR157C-B 5268 nt2.31□□□□□ -2.04
CUE1P38428 YML039WYML039W 5268 nt2.31□□□□□ -2.04
CUE1P38428 YML045WYML045W 5268 nt2.31□□□□□ -2.04
CUE1P38428 YMR050CYMR050C 5268 nt2.31□□□□□ -2.04
CUE1P38428 YOL103W-BYOL103W-B 5268 nt2.31□□□□□ -2.04
CUE1P38428 YBR012W-BYBR012W-B 5271 nt2.31□□□□□ -2.04
CUE1P38428 YOR142W-BYOR142W-B 5268 nt2.31□□□□□ -2.04
CUE1P38428 YPL257W-BYPL257W-B 5268 nt2.31□□□□□ -2.04
CUE1P38428 YPR158W-BYPR158W-B 5271 nt2.31□□□□□ -2.04
CUE1P38428 GYP7YDL234C 2241 nt2.3□□□□□ -2.04
CUE1P38428 DNA2YHR164C 4569 nt2.3□□□□□ -2.04
CUE1P38428 YCR024C-BYCR024C-B 267 nt2.3□□□□□ -2.04
CUE1P38428 DIG2YDR480W 972 nt2.3□□□□□ -2.04
CUE1P38428 RSR1YGR152C 819 nt2.3□□□□□ -2.04
CUE1P38428 YHR182C-AYHR182C-A 474 nt2.3□□□□□ -2.04
CUE1P38428 HOT13YKL084W 351 nt2.3□□□□□ -2.04
CUE1P38428 YLR339CYLR339C 552 nt2.3□□□□□ -2.04
CUE1P38428 SRT1YMR101C 1032 nt2.3□□□□□ -2.04
CUE1P38428 PIS1YPR113W 663 nt2.3□□□□□ -2.04
CUE1P38428 TOP2YNL088W 4287 nt2.3□□□□□ -2.04
CUE1P38428 DBF20YPR111W 1695 nt2.3□□□□□ -2.04
CUE1P38428 YKR078WYKR078W 1758 nt2.3□□□□□ -2.04
CUE1P38428 YDR239CYDR239C 2364 nt2.3□□□□□ -2.04
CUE1P38428 YIL082W-AYIL082W-A 4497 nt2.3□□□□□ -2.04
CUE1P38428 YBT1YLL048C 4986 nt2.29□□□□□ -2.04
CUE1P38428 KAR5YMR065W 1515 nt2.29□□□□□ -2.04
CUE1P38428 YCR045W-AYCR045W-A 351 nt2.29□□□□□ -2.04
CUE1P38428 EMI1YDR512C 564 nt2.29□□□□□ -2.04
CUE1P38428 DSE2YHR143W 978 nt2.29□□□□□ -2.04
CUE1P38428 PFS1YHR185C 714 nt2.29□□□□□ -2.04
CUE1P38428 YIL046W-AYIL046W-A 165 nt2.29□□□□□ -2.04
CUE1P38428 YAL034C-BYAL034C-B 354 nt2.29□□□□□ -2.04
CUE1P38428 NNF1YJR112W 606 nt2.29□□□□□ -2.04
CUE1P38428 CWC24YLR323C 780 nt2.29□□□□□ -2.04
CUE1P38428 SAM37YMR060C 984 nt2.29□□□□□ -2.04
CUE1P38428 MPP6YNR024W 561 nt2.29□□□□□ -2.04
CUE1P38428 YNR068CYNR068C 819 nt2.29□□□□□ -2.04
CUE1P38428 IZH4YOL101C 939 nt2.29□□□□□ -2.04
CUE1P38428 SMY2YBR172C 2223 nt2.28□□□□□ -2.04
CUE1P38428 YDR124WYDR124W 975 nt2.28□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms