Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 TAF12YDR145W 1620 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 YHR045WYHR045W 1683 nt4.34□□□□□ -1.71
TY1A-ER1P0CX71 MSH1YHR120W 2880 nt4.34□□□□□ -1.72
TY1A-ER1P0CX71 SIN4YNL236W 2925 nt4.34□□□□□ -1.72
TY1A-ER1P0CX71 UBP12YJL197W 3765 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 SEC9YGR009C 1956 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 PRM1YNL279W 1986 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 ASI1YMR119W 1875 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 RRN11YML043C 1524 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 SDH7YDR511W 402 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 YLR434CYLR434C 384 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 RPL16BYNL069C 597 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 YPR136CYPR136C 513 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 YCL012CYCL012C 405 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 DAP2YHR028C 2457 nt4.33□□□□□ -1.72
TY1A-ER1P0CX71 ADP1YCR011C 3150 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 PUB1YNL016W 1362 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 YCR018C-AYCR018C-A 255 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 NHP2YDL208W 471 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 COX4YGL187C 468 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 DFG10YIL049W 762 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 YKL183C-AYKL183C-A 213 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 UTP30YKR060W 825 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 APC5YOR249C 2058 nt4.32□□□□□ -1.72
TY1A-ER1P0CX71 EAP1YKL204W 1899 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 SPG3YDR504C 384 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 YHR213W-AYHR213W-A 234 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 YLR361C-AYLR361C-A 297 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 UNG1YML021C 1080 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 AIM32YML050W 936 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 YML057C-AYML057C-A 390 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 NSL1YPL233W 651 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 snR35snR35 204 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 YOL019WYOL019W 1656 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 GPI17YDR434W 1605 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 RIM21YNL294C 1602 nt4.31□□□□□ -1.72
TY1A-ER1P0CX71 YLR177WYLR177W 1887 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 YGR117CYGR117C 1431 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 GAL4YPL248C 2646 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 VAC8YEL013W 1737 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 MPS3YJL019W 2049 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 OTU2YHL013C 924 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 ECM34YHL043W 513 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 TCD1YHR003C 1290 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 ILV5YLR355C 1188 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 ICY1YMR195W 384 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 HUB1YNR032C-A 222 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 SIL1YOL031C 1266 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 RRD2YPL152W 1077 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 YPR195CYPR195C 330 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 UTP25YIL091C 2166 nt4.3□□□□□ -1.72
TY1A-ER1P0CX71 MIP6YHR015W 1980 nt4.29□□□□□ -1.72
TY1A-ER1P0CX71 MSC7YHR039C 1935 nt4.29□□□□□ -1.72
TY1A-ER1P0CX71 STP2YHR006W 1626 nt4.29□□□□□ -1.72
TY1A-ER1P0CX71 YDR526CYDR526C 471 nt4.29□□□□□ -1.72
TY1A-ER1P0CX71 SMX2YFL017W-A 234 nt4.29□□□□□ -1.72
TY1A-ER1P0CX71 RPS24BYIL069C 408 nt4.29□□□□□ -1.72
TY1A-ER1P0CX71 YAR029WYAR029W 225 nt4.29□□□□□ -1.72
TY1A-ER1P0CX71 ERP4YOR016C 624 nt4.29□□□□□ -1.72
TY1A-ER1P0CX71 DNF2YDR093W 4839 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 FAA3YIL009W 2085 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 UBX7YBR273C 1311 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 PRP28YDR243C 1767 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 UTP15YMR093W 1542 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 YRA1YDR381W 681 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 YEL045CYEL045C 426 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 YER097WYER097W 330 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 AAD16YFL057C 459 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 CGR1YGL029W 363 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 SCW4YGR279C 1161 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 RAD14YMR201C 1116 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 PEX6YNL329C 3093 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 GEP3YOR205C 1671 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 IRC3YDR332W 2070 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 TIF4632YGL049C 2745 nt4.28□□□□□ -1.72
TY1A-ER1P0CX71 PIN4YBL051C 2007 nt4.28□□□□□ -1.73
TY1A-ER1P0CX71 PDR15YDR406W 4590 nt4.28□□□□□ -1.73
TY1A-ER1P0CX71 RPN6YDL097C 1305 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 YDR194W-AYDR194W-A 153 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 YEL067CYEL067C 588 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 MVB12YGR206W 306 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 YGR269WYGR269W 327 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 YHR212CYHR212C 336 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 YIR014WYIR014W 729 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 YAR060CYAR060C 336 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 SRL1YOR247W 633 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 TSC3YBR058C-A 243 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 MRPS5YBR251W 924 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 FKH2YNL068C 2589 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 RSC3YDR303C 2658 nt4.27□□□□□ -1.73
TY1A-ER1P0CX71 YDR338CYDR338C 2088 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 DBF20YPR111W 1695 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 GWT1YJL091C 1473 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 MET12YPL023C 1974 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 YCL065WYCL065W 369 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 TRX3YCR083W 384 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 YIL054WYIL054W 318 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 TDH2YJR009C 999 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 RPS4AYJR145C 786 nt4.26□□□□□ -1.73
TY1A-ER1P0CX71 VTI1YMR197C 654 nt4.26□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms