Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 AL031602.1-201ENST00000633169 911 ntBASIC14.88□□□□□ -0.03
LINC01549A6NIU2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC01549A6NIU2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 AC090340.1-201ENST00000620778 4980 ntBASIC14.87□□□□□ -0.03
LINC01549A6NIU2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 AL499627.2-201ENST00000606283 725 ntBASIC14.87□□□□□ -0.03
LINC01549A6NIU2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 AL020996.1-203ENST00000536896 2307 ntBASIC14.87□□□□□ -0.03
LINC01549A6NIU2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC01549A6NIU2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC01549A6NIU2 BX323043.1-201ENST00000641006 1765 ntBASIC14.85□□□□□ -0.03
LINC01549A6NIU2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC01549A6NIU2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC01549A6NIU2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms