Protein–RNA interactions for Protein: Q99337

TY1B-NL2, Transposon Ty1-NL2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL2Q99337 ACO2YJL200C 2370 nt12.65□□□□□ -0.38
TY1B-NL2Q99337 MHF1YOL086W-A 273 nt12.65□□□□□ -0.38
TY1B-NL2Q99337 YCR025CYCR025C 411 nt12.64□□□□□ -0.39
TY1B-NL2Q99337 YER190C-AYER190C-A 576 nt12.63□□□□□ -0.39
TY1B-NL2Q99337 YGR296C-AYGR296C-A 576 nt12.63□□□□□ -0.39
TY1B-NL2Q99337 YML133W-AYML133W-A 576 nt12.63□□□□□ -0.39
TY1B-NL2Q99337 YNL339W-AYNL339W-A 576 nt12.63□□□□□ -0.39
TY1B-NL2Q99337 YPL283W-AYPL283W-A 576 nt12.63□□□□□ -0.39
TY1B-NL2Q99337 RIB7YBR153W 735 nt12.62□□□□□ -0.39
TY1B-NL2Q99337 POT1YIL160C 1254 nt12.61□□□□□ -0.39
TY1B-NL2Q99337 SAM35YHR083W 990 nt12.59□□□□□ -0.39
TY1B-NL2Q99337 SAM50YNL026W 1455 nt12.59□□□□□ -0.39
TY1B-NL2Q99337 CSM1YCR086W 573 nt12.57□□□□□ -0.4
TY1B-NL2Q99337 LIP1YMR298W 453 nt12.56□□□□□ -0.4
TY1B-NL2Q99337 YPL251WYPL251W 303 nt12.56□□□□□ -0.4
TY1B-NL2Q99337 PRM5YIL117C 957 nt12.54□□□□□ -0.4
TY1B-NL2Q99337 YKR005CYKR005C 1578 nt12.54□□□□□ -0.4
TY1B-NL2Q99337 YPR126CYPR126C 309 nt12.51□□□□□ -0.41
TY1B-NL2Q99337 CTI6YPL181W 1521 nt12.5□□□□□ -0.41
TY1B-NL2Q99337 YGR259CYGR259C 441 nt12.48□□□□□ -0.41
TY1B-NL2Q99337 HIF1YLL022C 1158 nt12.48□□□□□ -0.41
TY1B-NL2Q99337 RPT5YOR117W 1305 nt12.48□□□□□ -0.41
TY1B-NL2Q99337 SSN3YPL042C 1668 nt12.47□□□□□ -0.41
TY1B-NL2Q99337 SAM3YPL274W 1764 nt12.46□□□□□ -0.42
TY1B-NL2Q99337 YMR103CYMR103C 363 nt12.45□□□□□ -0.42
TY1B-NL2Q99337 BNI5YNL166C 1347 nt12.43□□□□□ -0.42
TY1B-NL2Q99337 LYS20YDL182W 1287 nt12.42□□□□□ -0.42
TY1B-NL2Q99337 IGD1YFR017C 588 nt12.42□□□□□ -0.42
TY1B-NL2Q99337 TOA2YKL058W 369 nt12.42□□□□□ -0.42
TY1B-NL2Q99337 IRC24YIR036C 792 nt12.41□□□□□ -0.42
TY1B-NL2Q99337 YBL086CYBL086C 1401 nt12.39□□□□□ -0.43
TY1B-NL2Q99337 RPL12BYDR418W 498 nt12.38□□□□□ -0.43
TY1B-NL2Q99337 HOG1YLR113W 1308 nt12.38□□□□□ -0.43
TY1B-NL2Q99337 PHO23YNL097C 993 nt12.37□□□□□ -0.43
TY1B-NL2Q99337 CDD1YLR245C 429 nt12.37□□□□□ -0.43
TY1B-NL2Q99337 YMR007WYMR007W 381 nt12.36□□□□□ -0.43
TY1B-NL2Q99337 NIF3YGL221C 867 nt12.35□□□□□ -0.43
TY1B-NL2Q99337 MFG1YDL233W 1377 nt12.35□□□□□ -0.43
TY1B-NL2Q99337 GND2YGR256W 1479 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)DtA(AGC)D 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)FtA(AGC)F 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)GtA(AGC)G 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)HtA(AGC)H 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)JtA(AGC)J 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)K1tA(AGC)K1 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)K2tA(AGC)K2 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)LtA(AGC)L 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)M1tA(AGC)M1 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)M2tA(AGC)M2 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 tA(AGC)PtA(AGC)P 73 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 OYE2YHR179W 1203 nt12.34□□□□□ -0.43
TY1B-NL2Q99337 TPS1YBR126C 1488 nt12.33□□□□□ -0.44
TY1B-NL2Q99337 SAM2YDR502C 1155 nt12.33□□□□□ -0.44
TY1B-NL2Q99337 IPL1YPL209C 1104 nt12.33□□□□□ -0.44
TY1B-NL2Q99337 BRR1YPR057W 1026 nt12.33□□□□□ -0.44
TY1B-NL2Q99337 YOR343CYOR343C 327 nt12.32□□□□□ -0.44
TY1B-NL2Q99337 DAK2YFL053W 1776 nt12.32□□□□□ -0.44
TY1B-NL2Q99337 SWM1YDR260C 513 nt12.31□□□□□ -0.44
TY1B-NL2Q99337 TRT2tT(CGU)K 72 nt12.31□□□□□ -0.44
TY1B-NL2Q99337 RCR1YBR005W 642 nt12.31□□□□□ -0.44
TY1B-NL2Q99337 IML3YBR107C 738 nt12.31□□□□□ -0.44
TY1B-NL2Q99337 HXT1YHR094C 1713 nt12.3□□□□□ -0.44
TY1B-NL2Q99337 YNL024CYNL024C 741 nt12.3□□□□□ -0.44
TY1B-NL2Q99337 FLX1YIL134W 936 nt12.28□□□□□ -0.44
TY1B-NL2Q99337 OYE3YPL171C 1203 nt12.28□□□□□ -0.44
TY1B-NL2Q99337 NAS2YIL007C 663 nt12.26□□□□□ -0.45
TY1B-NL2Q99337 GRH1YDR517W 1119 nt12.25□□□□□ -0.45
TY1B-NL2Q99337 YAL016C-AYAL016C-A 315 nt12.25□□□□□ -0.45
TY1B-NL2Q99337 YOR268CYOR268C 399 nt12.25□□□□□ -0.45
TY1B-NL2Q99337 PAU21YOR394W 495 nt12.25□□□□□ -0.45
TY1B-NL2Q99337 PAU22YPL282C 495 nt12.25□□□□□ -0.45
TY1B-NL2Q99337 TOS1YBR162C 1368 nt12.23□□□□□ -0.45
TY1B-NL2Q99337 DBP1YPL119C 1854 nt12.22□□□□□ -0.45
TY1B-NL2Q99337 FCY1YPR062W 477 nt12.22□□□□□ -0.45
TY1B-NL2Q99337 MSC1YML128C 1542 nt12.21□□□□□ -0.45
TY1B-NL2Q99337 DDI1YER143W 1287 nt12.21□□□□□ -0.45
TY1B-NL2Q99337 RAS2YNL098C 969 nt12.21□□□□□ -0.45
TY1B-NL2Q99337 SPE2YOL052C 1191 nt12.21□□□□□ -0.45
TY1B-NL2Q99337 LEU9YOR108W 1815 nt12.2□□□□□ -0.46
TY1B-NL2Q99337 PCP1YGR101W 1041 nt12.2□□□□□ -0.46
TY1B-NL2Q99337 SNF1YDR477W 1902 nt12.19□□□□□ -0.46
TY1B-NL2Q99337 TGA1tA(UGC)A 73 nt12.17□□□□□ -0.46
TY1B-NL2Q99337 tA(UGC)EtA(UGC)E 73 nt12.17□□□□□ -0.46
TY1B-NL2Q99337 tA(UGC)GtA(UGC)G 73 nt12.17□□□□□ -0.46
TY1B-NL2Q99337 tA(UGC)LtA(UGC)L 73 nt12.17□□□□□ -0.46
TY1B-NL2Q99337 tA(UGC)OtA(UGC)O 73 nt12.17□□□□□ -0.46
TY1B-NL2Q99337 SEC61YLR378C 1443 nt12.16□□□□□ -0.46
TY1B-NL2Q99337 DPS1YLL018C 1674 nt12.16□□□□□ -0.46
TY1B-NL2Q99337 SPS100YHR139C 981 nt12.14□□□□□ -0.47
TY1B-NL2Q99337 YMR206WYMR206W 942 nt12.14□□□□□ -0.47
TY1B-NL2Q99337 KAE1YKR038C 1161 nt12.13□□□□□ -0.47
TY1B-NL2Q99337 YER188WYER188W 720 nt12.12□□□□□ -0.47
TY1B-NL2Q99337 EAF3YPR023C 1206 nt12.11□□□□□ -0.47
TY1B-NL2Q99337 HRA1HRA1 564 nt12.11□□□□□ -0.47
TY1B-NL2Q99337 MOB1YIL106W 945 nt12.1□□□□□ -0.47
TY1B-NL2Q99337 SER2YGR208W 930 nt12.08□□□□□ -0.47
TY1B-NL2Q99337 TMA23YMR269W 636 nt12.08□□□□□ -0.47
TY1B-NL2Q99337 ABZ2YMR289W 1125 nt12.08□□□□□ -0.47
TY1B-NL2Q99337 FUB1YCR076C 753 nt12.08□□□□□ -0.48
TY1B-NL2Q99337 ADE8YDR408C 645 nt12.08□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 58.7 ms